KEGG   Shewanella livingstonensis: EGC82_06850
Entry
EGC82_06850       CDS       T05875                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
slj  Shewanella livingstonensis
Pathway
slj00740  Riboflavin metabolism
slj01100  Metabolic pathways
slj01110  Biosynthesis of secondary metabolites
slj01240  Biosynthesis of cofactors
slj02024  Quorum sensing
Module
slj_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:slj00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    EGC82_06850 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EGC82_06850 (ribD)
Enzymes [BR:slj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     EGC82_06850 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     EGC82_06850 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam APOBEC3
Other DBs
NCBI-ProteinID: AZG72520
UniProt: A0A3G8LUU0
LinkDB
Position
1583937..1585082
AA seq 381 aa
MSNWSTFDTQMMSRAIGLAEKGRYTTRPNPCVGCVIVYQNKIIGEGYHQRAGQGHAEVNA
LKMVHDNGLSAEGATAYVTLEPCSHYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGI
TLLREAGVEVDVGLLSEQAYDLNLGFMKRMKTGLPWITVKIAASLDGKTALSNGVSKWIT
GSAARADVQKYRASHCVLITGIETILVDDPSLNVRYEALGELTTRHTKDEIFQPLRVVLD
SRARLTPAQQLFSINSPILLVSGCEYPANSKTAFPQHVSFLQLECDSSGRIPLLALLTYL
GQQANSVLIEAGATLAGAFVAQGLADDIILYQAPKLLGSHGRNMLQLPDYSAMEQTPSLQ
LIDERNVGQDKRYILRYNQPY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtctaactggtctacctttgacacccaaatgatgagccgtgctatagggcttgctgaa
aaaggtcgttataccactaggccgaacccttgtgtcggttgtgtcattgtttatcagaat
aagattattggtgagggttatcatcaacgtgcgggccaagggcatgccgaagttaatgcg
ctgaaaatggtgcatgataatggcttgtctgctgaaggtgctaccgcgtatgtcactctt
gaaccttgtagccattatggccgcacaccaccttgtgctttaggcttaattaacgccaaa
gttgccagagttgtggtcgcagtgactgatgccaatcctgaagtgtctggccgcgggatt
accctattacgtgaggctggtgttgaggttgatgttggattgctcagcgagcaggcctat
gaccttaacctgggttttatgaaacggatgaaaactgggcttccttggataaccgtgaaa
atagccgccagcttagacggtaaaacagccctatctaatggggtgtctaagtggattacc
ggcagtgcagcaagagctgatgtgcaaaaataccgtgccagtcactgcgtattaatcacc
ggtattgaaaccattcttgtcgatgaccctagccttaatgtgcgctatgaggcgctaggt
gagttaaccactcgtcatacaaaagatgaaatctttcagcccttaagagtggtactggat
agccgcgcaagattaacccctgcacaacagttattttcgattaacagccctatattactg
gtttctggctgtgaatatcctgccaacagcaaaactgcatttccgcaacacgtgtctttt
ttacaattagaatgtgactcgtcaggtagaatccctttgttagctttgctaacgtattta
ggtcaacaggctaattctgtattaattgaagcgggcgcgaccctagcgggtgcgtttgtc
gctcaaggccttgctgatgatattatactttatcaagcacctaaactattaggcagccat
ggacgtaatatgttgcagttacctgattacagtgcaatggagcaaacgccgtcactgcaa
ttaattgatgaacgcaacgttggacaagataagcgttatatcctcagatataatcaaccc
tattaa

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