Shewanella livingstonensis: EGC82_15795
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Entry
EGC82_15795 CDS
T05875
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00730
Thiamine metabolism
slj01100
Metabolic pathways
slj01240
Biosynthesis of cofactors
slj04122
Sulfur relay system
Module
slj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EGC82_15795 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EGC82_15795 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slj03016
]
EGC82_15795 (thiI)
Enzymes [BR:
slj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
EGC82_15795 (thiI)
Transfer RNA biogenesis [BR:
slj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EGC82_15795 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AZG74085
UniProt:
A0A3G8LYA8
LinkDB
All DBs
Position
complement(3656356..3657810)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKSVRVRFTKMLETNIRNVLKNVDDGVKVLRLYDRILVKVPTDKPE
LCDTFAERLACIPGIAHVVQVSEYSFDSIDHIYQQVLPKYRDEIAGKTFCVRVKRSGNHD
FNSIEVERYVGGGLNQHTEALGVKLKDPDVTVNLEINQDKLYMVERRIQGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWQKYGESHKVR
FISVPFEPVVEEILERIDNGLMGVVLKRVMMRAATRIADKFGIQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLIAMDKQDIINQSRIIGTEDFAKSIPEYCGVISQKPTVKAILS
KVEAQELKFSEDLIDRVIESAVVMDIRDIAAEMNQQVTETETVKDVASGEIIIDVRAPEE
EERSPLSIDNVMVKAIPFFKLATQFADLDKSKTYLLYCDRGVMSKLQALYLVEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtaccctgaaatcatgatgaagagcaagtcggtaagagtg
cgctttactaaaatgctcgaaaccaatattcgtaatgtacttaagaacgtggatgacggt
gttaaagttctacgtttatacgatcgtattttagtaaaggtaccgacggataagccggag
ttgtgtgataccttcgcagaaagactcgcttgtatcccaggtattgctcacgttgttcaa
gtgagtgagtacagttttgattcgattgatcatatttatcagcaggttttaccaaagtac
cgtgatgaaattgccggtaaaacgttctgtgtacgggtaaaacgttctggtaatcatgat
tttaattcaattgaagttgaacgctatgtgggcggtggattaaatcaacatactgaggcg
ctaggggtaaagcttaaagaccctgacgtaaccgttaatcttgaaatcaatcaagataag
ctttatatggtagagcgccgtattcaaggtttaggtggtttccctatggcgacacaagaa
gatgtattgtcgcttatatcgggtggctttgattctggggtgtcgagttttcagtttatt
aagaaaggcgctcgtacccattattgtttctttaatttaggtggtgctcagcacgaaatt
ggcgtgaagcaagtggcttatcatttatggcaaaagtatggtgagtcgcacaaagtacgc
tttatttcagtcccctttgaacctgtagttgaagagatccttgaacgtatagataacggt
ctaatgggcgtggtacttaagcgtgtaatgatgcgagccgcaactcgtatagctgacaag
ttcggtattcaagcattagttaccggagaaagcttaggccaagtctctagccaaacactg
actaatttgaatgttattgatcgttgtactgatttattgattttacgcccgcttatcgca
atggataaacaagacattattaatcagagtcgtattattggtactgaagattttgctaag
tctattcctgagtattgtggtgttatttcacaaaaaccgacggttaaagcgatattatca
aaagttgaagcacaagagcttaaattttctgaggatttaatcgaccgggtcattgagtct
gccgtggtgatggatattcgtgatattgcagccgaaatgaaccaacaagtgactgagact
gaaacggttaaagatgtcgcttctggtgaaatcatcattgatgttcgtgctcctgaagaa
gaagagcgaagcccactgtcgattgataatgtgatggttaaggcgattcctttctttaaa
ttagctacccagtttgctgatttagataagtctaaaacgtatttattgtattgtgaccgt
ggtgtgatgagtaagctgcaagctttatatcttgtagagcaaggctatactaacgttaaa
gtgtaccgtccttaa
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