Shewanella loihica: Shew_1812
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Entry
Shew_1812 CDS
T00489
Name
(GenBank) putative RNA methylase
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slo03009
]
Shew_1812
Enzymes [BR:
slo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
Shew_1812
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
Shew_1812
Ribosome biogenesis [BR:
slo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Shew_1812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
THUMP
Methyltransf_15
Methyltransf_11
Met_10
Methyltransf_3
PrmA
N6_N4_Mtase
N6_Mtase
Methyltransf_24
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ABO23678
UniProt:
A3QDY0
LinkDB
All DBs
Position
2083035..2085170
Genome browser
AA seq
711 aa
AA seq
DB search
MLNFFAAAPRGYEYALSLELAEFGAAEIKESVAGVYFSAPLNLAYRITLWSRLASRIILV
IYKGPCENPEQLYNAAYCIDWQTHFSNKSSFSIDFHGVGGFIKNSQFGALKIKDAVVDRF
RDDGCPRPDVARVDADFKIDAHYRRGQITLGINFSGPALHQRGYRSTTGEAPLKENLAAN
MLVRSGWQQSPKDLLDPFCGSGTILIEAAMMACDIAPALQRRRFGFEHWLRHQEADWQEL
LAEAKARASIGTKRCEIKFYGSDIDSRLVALAKRNAQNAGVAELIELSVSNALNVTPPVE
QGYLITNPPYGERLGNVTSLLQLYYQLGDKLKAEFGGWQVAVLNSDIELLSALKLKADKQ
MKMYNGALECAFNLYTLHANSTRRLDPSQVLSQGGEVSEVATAFSNRIKKNHKQLSKWAQ
REGIDSYRLYDADIPEYNVAVDIYLDHVVIQEYSAPKSIPEAVTKRRLTDVLLVLPQAIG
VDPDKIILKTRERQKGTNQYQKLDATKLELVTTEYGAKFKLNLKDYLDTGLFLDHRLTRK
LVGEKSKGRDVLNLFAYTGSASVHAALGGAKSVTTVDMSNTYLNWAQDNFELNGLKGKQY
QFIQGDCLQWIDDCDQQYDLIFIDPPTFSNSKRMEDSFDVQRDHVKLLSALVKLLRPGGE
ILFSNNKRKFKMDSEALSALGLSITNLDKQTLPLDYKRNPHIHNTWLIQHA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttttttgccgcagccccaagaggctatgagtacgccctgtcgttggaactg
gcagagtttggcgccgccgagataaaggaaagcgttgccggtgtctatttctctgcgccc
cttaatctggcttaccgtataaccctatggtcgcgactcgccagccgtatcattctggtg
atctacaaggggccctgtgagaatcccgagcagctctataatgcggcctactgcatcgac
tggcagacccatttctccaataagagcagcttcagcatagattttcatggtgtgggtggc
tttataaagaactcacagtttggcgcgcttaaaataaaagatgcggtcgtcgaccgtttt
cgtgacgatggctgtccacgtcccgatgtggcccgtgtcgatgctgactttaagatagat
gctcattatcgccgcggccaaattaccctggggattaacttctctgggcctgctctgcat
cagcgcggttatcgctccaccacgggggaggcaccactaaaggaaaacctggcggccaac
atgttggtacgtagcggctggcaacagtcgccgaaagatctactcgaccctttctgcgga
agtggcaccattttaattgaggcggctatgatggcctgcgatatcgcacctgcgttgcag
cgtcgccgtttcggtttcgagcactggctacgccatcaagaggccgactggcaggagctg
cttgctgaggccaaggcccgcgcttctatcggtaccaagcgctgtgagatcaagttttat
ggctcggatatcgattcgcgtctggtggcgctggcaaagcgtaacgcgcaaaacgctggc
gttgcggagcttatcgagttgtcggtctccaacgccctcaatgttacgccgccggtggag
cagggctatctgatcaccaacccgccttatggtgagcgtctgggcaatgtcacttcgctg
ttgcagctctactatcaattgggtgacaagctcaaggccgaatttggcggctggcaggtg
gctgtgctcaacagcgacatcgaactcctctcggcccttaagctgaaagccgacaagcag
atgaagatgtataacggcgcgctcgagtgtgcctttaacctctatacgctgcatgccaac
agcacccgtcgtcttgaccctagccaggtgttgagccagggcggtgaggtgagcgaggtc
gccacggcctttagtaaccgtatcaagaaaaatcataagcagctgagcaaatgggctcag
cgcgaggggatagatagctatcgcctctacgacgctgatattcccgagtacaatgtggcg
gtagatatctatctggatcatgtggtgatccaggagtattcggcgcctaagtcgattccc
gaggcggtgactaagcgtcgcctgacagatgtcttgctggtgttgcctcaggccatcggc
gtcgaccccgataagattattctcaagactcgtgagcgtcagaagggtactaaccaatac
cagaagctagatgccactaagctcgagctggtcaccacagagtacggcgccaagtttaag
cttaacttgaaggactacctggatacaggtctcttcttagatcacagactgacccgcaag
ctagtgggtgagaagtcgaaaggcagagacgtgcttaacctgtttgcctataccggcagc
gcctcggtgcacgcggctctggggggggccaagtcggtgactacggtcgatatgtctaac
acctatctcaactgggcgcaggacaacttcgagttgaatggccttaaaggcaagcagtat
cagtttattcagggcgattgcttgcagtggatagatgactgcgaccagcagtatgacctg
atcttcatcgatccaccgaccttctctaactccaagcgcatggaagattctttcgatgtg
cagcgcgaccacgtgaagctgttgagcgcgctggtgaagctgctgcgtccgggcggggag
atactgttctccaacaacaagcgtaaatttaagatggatagcgaggcgctcagtgccctt
ggcttgtcgatcactaacctggataagcagacgctgccgctggattacaagcgtaatccg
catattcataacacctggttgattcagcatgcctaa
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