Shewanella loihica: Shew_1820
Help
Entry
Shew_1820 CDS
T00489
Name
(GenBank) 2,3-dimethylmalate lyase
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
slo
Shewanella loihica
Pathway
slo00640
Propanoate metabolism
slo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shew_1820
Enzymes [BR:
slo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
Shew_1820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
Motif
Other DBs
NCBI-ProteinID:
ABO23686
UniProt:
A3QDY8
LinkDB
All DBs
Position
2092990..2093868
Genome browser
AA seq
292 aa
AA seq
DB search
MSAGKKFRQALADNKPLQIVGTINAYTAMMAKQIGHKAIYLSGGGVANASYGLPDLGMTS
LNDVIVDVQRITSACDLPLLVDIDTGWGGAFNIAKTIKDMEKAGAAAVHMEDQVAQKRCG
HRPNKEIVSVEEMVDRIKAAVDARTDPDFFIMARTDAFAQEGLEAAIERAKAYVAAGADG
IFAEAVKTEEHYRAFAEALDVPILANITEFGQTELWNREQLGQWGAAMVLYPLSAFRAMN
KAAENVYQTILRDGDQKAVLDTMQTRMELYDYLGYHAYEQKLDSLFAEGKNK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggaaagaaattccgtcaggccttggccgacaacaagccattgcagatcgtc
ggtaccattaacgcctacacggccatgatggccaagcagatcggtcacaaggcgatctat
ctctctggtggcggggtagccaacgcctcttatggtctgccggatctggggatgacctca
ctaaacgatgtgatcgtcgacgtgcagcgcatcacctctgcctgtgatctgccgctgctg
gtggatatagatacaggttggggcggggcatttaacatcgccaagaccatcaaagatatg
gaaaaggcgggtgccgcggccgtgcacatggaagaccaggtcgctcagaagcgttgtggt
caccgtcctaacaaggagatcgtctcggttgaggagatggtggatcgtatcaaggcggcg
gtcgatgcgcgcacggatcctgacttcttcatcatggcccgtaccgatgccttcgctcag
gaaggactggaagctgccatcgaacgtgccaaggcctatgtggctgctggcgccgatggc
atcttcgccgaggcggtgaagacagaagagcattatcgtgcattcgccgaagccctagat
gtgcctattctggccaacatcacagagtttggtcagacagagctgtggaatcgcgagcag
ctgggtcagtggggcgcagccatggtgctctatccattgagtgccttcagagccatgaat
aaggcggcagagaatgtatatcaaaccattctgcgcgatggcgaccagaaggcggtactc
gatactatgcagacccgcatggagctctatgactatctcggttatcacgcctacgagcag
aagctcgacagcctgtttgccgaaggtaagaacaagtaa
DBGET
integrated database retrieval system