Syntrophothermus lipocalidus: Slip_1647
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Entry
Slip_1647 CDS
T01253
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slp03016
]
Slip_1647
Enzymes [BR:
slp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Slip_1647
Transfer RNA biogenesis [BR:
slp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Slip_1647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADI02406
UniProt:
D7CNX1
LinkDB
All DBs
Position
complement(1711109..1712443)
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AA seq
444 aa
AA seq
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MDIKARVTVYTLGCKVNQVESENIKQQFSDYGYQILSGDEVADVYVVNTCAVTHVSERKS
RAMLRRAKRKNPKAVVVATGCLAQVAPNLLAAMPEVDLVIGNSSKDRIAELVQNHRGQSS
KAVVVGELSKEPLRRGAWCLPAYERTRAFVKIQDGCESYCSYCLVPYARGPVRSKLPEDV
VREIDWLVSAGFKEIVITGIHTGMYGKDLADWDLVRLLETVLVKVQGDYRLRLSSIEPTE
ITKKLIELMASEKKLCRHLHIPLQSGSDRVLKLMNRRYTRGFYRDLVMMVTGRVPGTAVT
SDVMVGFPTESEEDFLDTLKLIDELPFAGLHVFPYSPRPNTAATDLYPRVENQVKEQRSK
ALLKLARHKQQRFIESCSGQTLTVLVEEVKENSRCEGLTDNYLRAEFYGGQLDPGQFVSV
RLVTSSGIPSWEVVSDRVSSHFGD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
attgacatcaaggctagggtcacagtttacactttgggttgcaaggtgaaccaggtagaa
agcgaaaacataaaacaacaattctcagattacggttaccagatactcagtggagacgaa
gtggcagatgtttacgtggtgaacacctgcgcggttacccacgttagtgagcgcaagtcc
cgggcaatgcttcggagggctaagcgtaagaaccccaaggcggtagtggtagccaccggt
tgcttagcccaggtggcgccaaacttgctggctgctatgcctgaagtagatctggttatc
ggcaatagctctaaggataggatagccgaactggtacaaaaccacaggggtcaatcttca
aaggcggtagttgtgggtgaactgtccaaagaaccgctgcgtcggggagcctggtgccta
cctgcctacgagaggacgcgtgccttcgtaaagattcaggacggttgtgaaagctactgt
tcgtattgtctggttccttatgctcgcgggccggtcaggagcaagctcccagaagacgtt
gtgcgagagatagactggttagtaagcgctggattcaaggaaatagtcataactggaatt
catactgggatgtatggaaaagacttggccgattgggatcttgtcaggttgttagaaacg
gttctggtcaaggtgcagggagattaccgtttgcgactgagttcaatcgaaccgacagaa
atcacgaaaaagctgattgagttaatggctagtgaaaagaagctatgccggcacctacac
attcctctgcaaagtggaagcgaccgggtgctgaaactgatgaaccggcgctacactcgc
ggtttctatcgggatctagttatgatggtaaccggccgagtccctggcacggccgtgact
tcggatgttatggtggggtttccaactgagtcagaggaggattttcttgatactctgaag
ctgatagatgaactgccatttgcaggactgcatgtttttccctattctccacggccaaac
actgcggctaccgacctttaccctcgggtcgagaatcaggtaaaagaacaaaggagcaaa
gccttactaaaactggcccggcacaaacagcaacggtttattgaaagttgttcaggccag
accttaaccgtgttggtggaagaggttaaggagaacagcaggtgcgaggggctaaccgac
aattacctcagggccgagttttacggcggtcagttggacccaggccagttcgtatccgtc
aggctggtgacatcatcaggaatcccttcatgggaggttgtgtccgacagggtatcttcc
cattttggggactag
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