Sideroxydans lithotrophicus: Slit_2033
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Entry
Slit_2033 CDS
T01196
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slt03009
]
Slit_2033
Enzymes [BR:
slt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Slit_2033
Ribosome biogenesis [BR:
slt03009
]
Prokaryotic type
ribosomal protein modification factors
Slit_2033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
ADE12261
UniProt:
D5CTU9
LinkDB
All DBs
Position
complement(2050062..2051387)
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AA seq
441 aa
AA seq
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MTSSKTAPQIGFVSLGCPKATVDSEHILTRMRAEGYIITPSYEDADLVVVNTCGFIDSAV
AESLEAIGEALQENGKVIVTGCLGAKGDIVMQTHPKVLAVTGPHETDAVMNAVHQHLPRL
HDPYVDLVPPQGVRLTPQHFAYLKISEGCNHRCTFCIIPSLRGDLVSRPVGDVMLEAEKL
VESGVRELLVISQDTSAYGVDVKYRTGFWGGKPLKTRMTDLAEALGSLGVWVRLHYVYPY
PSVDDVIPLMAEGKILPYLDIPFQHANERILKLMKRPASSENVLKRIQQWRSICPDIVLR
STFIVGFPGETEEEFEELLDFIEEAQLDRVGAFKYSPVEGAASNELPDHVDPDEQEDRLA
RLMYLQEEISAGKLAKKVGQTMTVLVDDVDDDGSVARSAADAPEIDGLVYIDDEQLEVGE
FVTVKIIDSDEHDLWAEVVKK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagcaaaacagcaccgcagatcggtttcgtctcgcttggttgccccaaggcg
acggtcgattccgaacacatcctcacgcgcatgcgcgccgaaggctacatcatcacgccg
agttacgaagacgccgatctggtggttgtgaatacctgcggcttcatcgacagcgccgtg
gcggaatcgctggaagccatcggcgaagcattgcaggagaacggaaaagtcatcgtcacc
ggctgccttggtgccaaaggcgatatcgtaatgcagacgcaccccaaggtgctcgccgtc
accggcccgcatgagacggatgccgtgatgaacgcagtgcaccagcacctgcccagattg
cacgacccctatgtcgacctggtgccgccgcagggcgtgcgcctcacaccgcagcatttc
gcctacctgaagatatccgagggctgcaaccaccgctgcaccttctgcatcatccccagc
ctgcgcggcgacctggtgagccgtccggtcggcgatgtgatgctggaagcggagaaactg
gtcgagtccggcgtcagggagctgctggtcatctcgcaggacacctcggcctacggcgtg
gatgtgaaataccgcaccggcttctggggcggcaagccgctcaagacgcgcatgaccgat
ctggcggaagcgctcggcagcctcggcgtgtgggtgcgcctgcattacgtctacccgtat
ccgagcgtggacgacgtcatcccgctgatggccgagggcaagatactgccgtacctcgac
atcccgttccagcacgccaacgagcggatactgaaactgatgaagcgtccggccagcagc
gagaacgtgctcaagcgcatccagcaatggcgcagcatctgccctgacatcgtgctgcgc
agcaccttcatcgtcggttttccgggcgaaacggaagaagagttcgaggaactgctcgat
ttcatcgaagaagcgcagctcgatcgcgttggcgcattcaagtattcgccggtggaaggt
gccgcttcgaacgaactgccggatcatgtcgaccccgacgagcaggaagaccgcctggcg
cgcctgatgtacctgcaggaagagatcagtgcagggaagctggcgaagaaagtcggccag
accatgaccgtgctggtggacgatgtggatgatgacggctctgttgcacgcagtgctgcc
gacgcaccggagatcgacggcctggtgtacatcgacgacgaacaactggaagtcggcgag
ttcgtcaccgtgaagatcatcgactccgacgagcacgatctatgggcggaagtggtcaag
aagtga
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