Sander lucioperca (pikeperch): 116034713
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Entry
116034713 CDS
T07345
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04020
Calcium signaling pathway
sluc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116034713 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116034713 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116034713 (grin1a)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116034713 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
116034713
NCBI-ProteinID:
XP_031133259
Ensembl:
ENSSLUG00000014397
LinkDB
All DBs
Position
14:25078186..25118145
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AA seq
951 aa
AA seq
DB search
MRLFLLAVLFSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALNEAPDGLISLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKGRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQPDGTCKEEITLNGVLIKKVICTGPNETIPGNLSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAE
PDPQKKASFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcttctcgtgctcctgcgcgcgggccggctgcgag
ccgaagatcgtgaacatcggggctgtgctgagccagaagagatacgagcaggtctttaaa
gatgccgtgacccaggccaaccaggtctacggcagggataaattcaagttgaccgctatc
tccgtaacgcacaaacccaacgccatccagatggctctctccgtctgcgaggacctcatc
tccagtcaggtctatgctatcctggtgagtcaccctccccagtccaatgaccacctgact
ccaacgcctgtctcatacactgcaggcttctaccgcatccccgtggtgggcctcaccacc
cgcatgtccatctactcagacaagagtatccacctgtcctttctgcggacagtccctccc
tattcccaccaggcgcacgtgtggttcgacctgatgcgggagttcaactggaaccacatc
atcttgatagtgagtgacgaccacgaggggcgggccgctcaaaagaggctcgagaccctc
ttggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggccaaagagctggaggcccgagtcatcatcctgtccgcc
agtgaggaagacgctgccgcagtgtacaaggctgcccgcttcctcaacatgacgggctcc
gggtacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgaacgaggcgcca
gacggtctgatcagcctccagcttatcaacgggaagaatgagtcagcccatatcaatgat
gcggtggctgtggtggcgcagtccatccaggagctctttgagaaggagaatatcacagaa
cctccgagaggatgtgtgggcaacaccaacatctggaaaacagggccactctttaaacgg
gtgctgatgtcctctaaatacccagagggcctcacaggacgcgtggagttcaatgacgac
ggagacaggaagtacgcccattacagtatactcaactaccagaagggtcgactcattcaa
gtcggcatatacaatgggacacaggtggtgatgaacaatcagcggaagatcatctggccc
ggaggagagactgagaaaccacagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtatatgtgaaacccactcaaccggatggaacatgcaaggag
gaaatcacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacctatcaggacgcccaattgtgccccaatgttgttatggattctgtatc
gatctcctcatcaagttggccatgaccatgaacttcacctacgaggtgcatctggtggct
gatggaaaatttggaactcaggagcgggtaaacaacagtaacaagaaagagtggaatggc
atgatgggagagctcctggggggcctggctgacatgattgtagccccgctgactataaac
aacgaacgagcgcagtacatcgaattctccaaaccctttaaatatcaaggcctgaccatc
ctcgttaaaaaggaaatccctcgcagtacattggactcgttcatgcagccgttccaaagc
acgctgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtaaacagtgaagaagaagaagaagatgcc
ctcaccttatcatctgctatgtggttctcctggggagtgttgctgaattctggaatcggt
gaaggtgccccgcgcagcttctcagcgagaatcctgggtatggtgtgggccggatttgcc
atgatcattgtggcttcttatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaagactgagaaacccatcggacaagttcatc
tacgccacagtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggctatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgaccttgtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcat
gagaacggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgaaaacatggcaggagtcttcatgttggtg
gcaggaggaatagcggcagggatcttcctaatcttcattgaaatcgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctggcctttgcggccgtcaatgtttggaggaag
aacctgcagccctcttcctctctagagactcaggatgataggaaaagtggtagagcagag
cccgacccccaaaagaaagcctcttttaggtccatcagtaccaccctggcctccagcatc
aagagacgtaggtcctccaaagacacgcagtacccacccactgacatcacgggccagctc
aatttgtctgacccgtctgtcagtactgtggtgtaa
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