Sander lucioperca (pikeperch): 116037572
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Entry
116037572 CDS
T07345
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
116037572 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sluc01002
]
116037572 (mmp2)
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
116037572 (mmp2)
Peptidases and inhibitors [BR:
sluc01002
]
Metallo peptidases
Family M10
116037572 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
116037572
NCBI-ProteinID:
XP_031137366
Ensembl:
ENSSLUG00000021732
LinkDB
All DBs
Position
3:11758445..11775249
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AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRIVLKVFLVQFIAFQATYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDITYRILGYSPDLDEEVINDAFFRAFKVWSDVTPLTFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKYGNADGEFCKFPFLF
MGTEYNSCTPQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTIAGNAEGAACKFPFTFLG
EKYDACTTQGRDDGYRWCATTENYDQDKTFGFCPETAMSTVGGNAEGSPCVFPFTFLGDT
YESCTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLPDDDIRGIQELYGVATDKPLPPTQGPVTPMDICKEPVVFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPMLVATYWPDLPAKIDAAYENPVEEKTVFFSGNEMWV
YKADELERGYPKRLSSLELPTDLQQIDAVFNFRKNRKTYLFAGDKFWRYDEDKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagttgtcgccggattgttctcaaagtgtttttggttcag
ttcatcgcctttcaagcaacatatgctgctccttcgcctataatcaggtttcctggagac
gatactactcccaaaacagacaaagaggttgctctgcactatctgaataagttttatgga
tgcccacaagacagatgtaaccttatggtgctcaaggacaccctgaagaaaatgcaaaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaactacaatttcttccacaggaaacccatgtgg
cagaagaaagacatcacttacagaatccttggatacagtcccgacctggatgaggaagtc
ataaatgacgctttcttcagagccttcaaagtatggagtgacgtcaccccactcacattc
acccgcctcatggatggagaggccgacatcatgattaattttggccgcaatgagcacgga
gatggttaccccttcgacggcaaagatggcctcttggctcatgccttcgctccagggccg
ggaattgggggagactcccactttgatgatgatgagcagtggacactgggagacggtcaa
gtggtaaaggtgaagtatggcaatgctgatggggagttctgtaaattccccttcctgttc
atgggcactgagtacaacagctgtacacctcagggccgtgatgacggcttcctgtggtgc
tcaaccacatacaatttcgatgaagacggcaaatatggattttgcccccatgaattacta
ttcaccatcgctggaaacgcagagggcgctgcatgtaaattccccttcacctttctggga
gagaagtatgacgcatgcaccactcaaggcagggatgatgggtaccgctggtgtgccacc
actgagaactatgaccaggacaaaaccttcgggttctgccctgaaactgccatgtcaacg
gtgggaggaaacgcagagggaagcccctgtgtcttccccttcaccttcttgggtgacacc
tacgagtcctgtacctcatctggacgcagcgatggtaaaatgtggtgcgcttccaccaag
agttatgatgacgaccgcaaatggggattctgtccagaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgcccttggcttggagcactctcaggaccccggagca
ttgatggcccccatttacacttacaccaaagacttcagacttcctgatgatgacatcaga
ggcatccaggagctatacggtgtggcgacagataagccgttgcctccaacccagggtcca
gtcactccaatggacatctgtaaagagccagttgtctttgatgctgtagcacagatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtcaacttcagaagcaag
cccaacggccctatgctggtggccacctactggccagacctgcctgccaagatcgatgct
gcctatgaaaacccagtggaggaaaaaactgtgttcttctcaggcaacgagatgtgggtc
tacaaagccgatgagctggagagaggctatcctaagaggctttcaagtcttgaactcccc
accgacctgcagcaaatcgacgctgtcttcaactttaggaagaacaggaagacttacctg
tttgctggggacaaattctggagatacgatgaagataagaagaaaatggaccctggcttc
cccaaacttattgctgattcctggaatggaatcccagatggcatagactctgccttcagt
cttaatggcattgattacagctacttcttcaaaggcaaccactatttcaaactggaagac
agcagcttgaagattgtcaaattgggtgaaatcacaaaggactggctcggttgttga
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