Sander lucioperca (pikeperch): 116038127
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Entry
116038127 CDS
T07345
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116038127
04020 Calcium signaling pathway
116038127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116038127
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116038127
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116038127
NCBI-ProteinID:
XP_035863511
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Position
11:20019358..20044153
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AA seq
1411 aa
AA seq
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MTDFERQKEEQRREVAIAIPLQEVANPHPQEEQLPYPTLAPVAVTCLKPSRRLRNWCLQV
AYSPWFVYLTVAMILFRCASLSYYKPGEMKSTMQEIVDALIFIYFIVEMLIKMMVLGVFG
YRGSYFSNNWNKLDFIINCGEMLDFILENCGIHFQFCQVLSPLRLISRVPSMLDVVTVLL
GIVPMLANVLVVYIFVIQIFAVVGVQLWAGQLRNRCFLGEDIPTKYNVSLNPYYMNKYGE
KLPFICSPDGKSGMQRCHDVPPYNINGENCSLAAHHYASAVDELVSTVAGASANACVNWN
MYYNVCRPGDHNPYMGTISFDNIGYAWITIFQVVSLEGWAEIMFYVIDAHSWWSVLFFVL
VTVMGSFIMMNVCAVVIATQFSDNMKQETAEQSVGAVAIAWLYGKLTGWLQGISRKFNRL
HNKVHPHGGSSRIDDPVIFQVWRPFMQKLKRTVNSKLFDRLIMFAVFLNIVTIAIEHHDQ
PKKLTDMLQISNIVFTIIFVVELVLKLLALAWTYFRDWNNSFDFVIVIISLWEIISNADG
RLSVLRAFRLLRFVRLLHFLPYLKRQLLVLKRTMKEASTLCMLLLFVIFIFSVMGMHLFG
GKYYYETQHGEVIVERKNFDTLLWAMVTVFQILTQENWNLVMYNAMATTSEWGCIYFVVV
IILGKHVLLNILVGIVVQSFQARHFSGMDQDSSRPSCESTSSTPEILIPENPAQTDNDDR
NGPSGPNRGLSLSACWPSRFNAINAAPGEDSAPTDTNGDNRCLNLIQKTVSWCKEHEEWS
FYVFSPQNRFRICCQRLISHKMFDYMVLVFILLSCITIAVERPEINLKSTERWILNTAGY
VFSAVFFVEMLFKVIALGLLFGKESYCRSAWNAVDGFLVILSLVDILISLASTSGKHVLG
VLKVLRLLRAMRPLRVIKRAPKLKLAVEALLASVKPIGHIVLICCTFLFFYAILGVQLFK
GKFFYCVGQDTRNITNKTECLSANYRWERKVYNFDSLPQALQSLFVMYSKDGWVNIMYDG
LDAVGVDEQPVTNYNEWMLVYFITFMIMSFFLLDMFIGVMVETFHQCQQDQKKAALQVLP
QEAEVSQDQCEDMHVSESEQIPYYEHYSSTRRSIHTFCTSNFVELFMAAIIFLSVLMMAF
QHYDQPPYVEKITDYSYYVFTVILIIEVLLKLVAFGLLRFLQSRWNLLDIAVVLISIISI
ILQEMDMSDSIPINPSILRVCRVLRLAQVLKAKKIRVLLKTIIKTLSQVGNICLLFAFFF
FVYAALGVELFGRLECTEDNVCLGLHRYTNFKHFGMALLTLYQVCTGDNWSGIMADTLRQ
CRPNDDGCLSYLYWVSPIYFSTFVVMAQFVLVNLVVAAIMQALEDSHENKPTNVCLPLEE
EEELERERATLSSGQSVGARCSHSISEGSSD
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgactgactttgagagacagaaggaggagcagcggcgggaggtggcaatcgctatacca
ttacaagaagttgccaacccacacccgcaggaggagcagctgccctacccgaccctggcc
cctgtagctgtcacctgcttaaaaccgtccagaagactccgtaactggtgtctgcaagtg
gcctatagcccatggtttgtgtatttgactgtagcgatgatcctcttcaggtgtgcaagt
ttgtcctactacaagccaggtgaaatgaagagcaccatgcaagagatagtggatgccttg
atctttatctactttattgtggaaatgctcatcaagatgatggtcctgggagtctttggc
tatagagggagttactttagcaacaactggaacaagctggacttcatcatcaactgtgga
gagatgttggattttatcttggaaaactgtggcatccacttccagttctgtcaagtgctc
tctccgttgcgactcatcagcagagtaccaagtatgctggatgtggtgacagtactctta
ggcatcgtgcccatgctggcaaatgttctggtcgtctacatcttcgtcatacaaatcttt
gccgttgtgggagtccagctgtgggcggggcagctgcgcaaccgctgcttcctgggagag
gacattcccacaaagtacaacgtgtccttaaatccatattacatgaacaagtatggtgaa
aaactcccatttatctgttcgcctgatggcaagagcgggatgcaacgctgccatgatgtg
ccaccttacaacataaatggggaaaactgctcattggctgctcaccactatgcttcagct
gtagatgagcttgtctctacggtggctggggccagtgctaacgcctgtgtcaactggaac
atgtactacaatgtctgtcggcccggggaccacaacccttacatgggaacaattagcttc
gacaacattggctacgcctggataaccatattccaggttgtctcactggaaggatgggcg
gagatcatgttttatgttattgatgctcattcttggtggagtgttttattttttgtactc
gtcactgttatgggctcctttatcatgatgaacgtgtgtgcagtcgtcatcgccacccag
ttctcggacaacatgaaacaagaaacagcagagcagagtgtcggtgctgtggctatcgca
tggctctatggcaagttaactggatggctgcaggggatctcccgtaaattcaacagactt
cataacaaggtgcatcctcatggcggcagcagcaggattgatgacccagtgatctttcag
gtctggagaccattcatgcaaaaacttaagaggactgtcaacagtaaactcttcgaccga
ttgatcatgtttgctgttttcctcaatattgtcaccatagccatagagcatcatgaccag
cctaagaagttgacagatatgttacagatcagtaacattgtcttcaccattatatttgtt
gtggagttggtcttaaagctgctggctctcgcgtggacatactttagggactggaacaac
agctttgactttgtcattgttatcatcagtttgtgggagataatatctaacgcagacggc
cggttgtcagttctgcgtgcatttcgtctgctgcggtttgtgaggctgcttcacttcctc
ccttacctgaagagacaactgctcgtgctgaagaggaccatgaaagaggcatccacactc
tgcatgctactgctgtttgtcatctttattttcagtgtaatgggtatgcacctgtttggt
ggtaaatattactacgagacgcagcacggagaagtcatcgttgagcgaaaaaactttgac
accctgctctgggccatggtcactgtgttccagattctgactcaggagaactggaatctg
gtgatgtacaatgccatggcaactacctccgaatggggctgtatctactttgttgtggtc
attatattgggaaaacatgttcttctcaatatacttgtgggcatagtggttcagagtttc
caggctaggcatttctcaggtatggatcaagactcttctcgcccttcctgtgagtctacc
agttccactccggaaatcttgatccctgaaaaccctgcacagacagataacgatgacaga
aacggcccctcaggacccaaccgaggcctctctctctctgcttgttggcccagcagattc
aatgcgattaacgctgccccaggagaagactctgcacctacagataccaatggggacaat
agatgtttgaacttgatccagaaaacggtcagctggtgcaaagaacatgaagagtggtcg
ttctatgtgttttctccacagaacaggttccgcatctgttgtcaacgcctgatctctcac
aagatgttcgactatatggttctggtcttcattctcctcagctgcatcaccatcgctgtg
gagaggcctgaaataaaccttaaaagcacggagcgttggatcctgaatacggccggttac
gtattctctgctgtcttctttgtagagatgctctttaaggttatagctcttggtttgctg
tttgggaaggagagctactgccggtctgcctggaatgctgtggatggttttttggtgatt
ctgtctttagtcgacatcttaatctctctggccagtacaagtggaaaacatgtgctgggc
gtgctcaaagttttgcgcctgctacgcgcaatgcgcccgctgagggtgatcaagcgagcc
ccaaaactgaagctggctgtggaagcccttctcgcctcggttaaacccatcgggcacatc
gttcttatttgctgcaccttcctctttttctatgccattcttggggtgcagttgttcaaa
gggaagttcttctactgtgtgggtcaggacacaagaaacatcaccaacaagactgaatgt
ctgtcggccaactatcgctgggaacgaaaggtgtacaactttgacagcctgcctcaggct
ctgcagtccttgtttgtaatgtactctaaggatggctgggtgaacattatgtatgatggc
ctggatgctgtgggagtagatgaacagcctgtaacgaactacaacgaatggatgcttgtt
tatttcatcaccttcatgattatgagcttctttctcctcgacatgtttattggtgtaatg
gtggagaccttccaccagtgtcagcaggatcaaaaaaaagcagctttacaagtgttacca
caagaggccgaagtatcacaggaccagtgcgaggacatgcatgtttcagagtctgagcag
attccatattacgaacattactcctctactcgtcggtctatccacactttttgtaccagt
aacttcgtggaactcttcatggctgccataattttcctcagtgtcttaatgatggctttc
caacattatgatcaacctccgtatgtagagaagattacagactattcctactatgtgttc
accgtcatcctgatcatcgaagtcctgctaaagcttgtggcgtttggcttactgaggttc
ttacaaagcagatggaatctgctggacattgctgtcgtcttgatttccataatcagtatt
attttacaagagatggatatgtcagactcaattcccattaatcccagcatccttagagtc
tgtagagtactcagactagcacaagtgctgaaggccaaaaagatacgagttctgctgaaa
accattatcaagacgctgtcacaggttggaaatatttgtctactttttgcattcttcttc
ttcgtctacgctgcgctgggagtggagctctttggcaggctagaatgcaccgaagataac
gtttgcctgggtttacatcgatacaccaactttaaacactttgggatggccctgctcacg
ctctaccaagtgtgcaccggagacaactggagcgggattatggcagacacattgaggcaa
tgccgtccaaacgatgatggctgtttgagctacttgtactgggtctctccgatctacttc
tccacttttgtggttatggcccagtttgtgctggtaaacctggtggtggcagcgatcatg
caagcactggaggacagccacgagaacaaacctactaatgtctgtctccccctggaggag
gaagaagaactggagcgtgagcgggccacgctgtcttcaggccagagtgtcggagccaga
tgcagccacagcatctccgagggatcctcagactag
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