Sander lucioperca (pikeperch): 116039354
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Entry
116039354 CDS
T07345
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03008
Ribosome biogenesis in eukaryotes
sluc03013
Nucleocytoplasmic transport
sluc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116039354 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
116039354 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116039354 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116039354 (xpo1b)
03009 Ribosome biogenesis [BR:
sluc03009
]
116039354 (xpo1b)
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116039354 (xpo1b)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116039354 (xpo1b)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116039354 (xpo1b)
Ribosome biogenesis [BR:
sluc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116039354 (xpo1b)
Pre-60S particles
116039354 (xpo1b)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116039354 (xpo1b)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116039354 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Rap1a
Motif
Other DBs
NCBI-GeneID:
116039354
NCBI-ProteinID:
XP_031139970
Ensembl:
ENSSLUG00000003545
LinkDB
All DBs
Position
15:complement(11776492..11805568)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKN
FEEFPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ITTVLNPASPNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDF
LVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcatggggtgggg
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcacccggatgcctgg
acgagagtggacaccatcctcgagttctcccagaacatgaacaccaagtactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattcttcccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacattggaaagctgaacatgatccttgttcagatcctcaagcag
gagtggcccaagcactggcccacttttatcagtgacattgttggggcaagtcgtaccagc
gagagcctttgtcagaacaacatggttattcttaagcttctcagcgaggaggtctttgat
ttctccagtggccagatgacccaggtcaaagccaagcacctaaaagacagcatgtgcaat
gaattctcacagatattccagctttgccagtttgtcatggaaaattcccagaatgccccc
ctggtccacgctactctggagaccctcttacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacgttggtgtataagttcttgaacgtgcccatgttt
cgcaatgtgacactgaagtgcctcacagagattgccggtgtgagcgtcagccagtatgag
gagcagtttgtcacactcttcaccctgaccatgtgtcaactcaaacagatgctgcctctg
aacaccaacattcgtctggcctacgctaacgggaaagatgatgagcagaacttcatccag
aacctcagtctgttcctctgtactttcctaaaagagcacgggcagctcatcgagaaacgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctggtgtcagaggtg
gaagagactgagatcttcaaaatttgtctggagtattggaaccacctggctgctgagctc
tacagagaaagtcccttctctacgtccacgtcccccctgctctctggcaaccagcacttt
gacgtgccaccacgcagacagctctatctgcctgtactctccaaggtgcgtctgctaatg
gtaagtcggatggccaagcccgaggaggtattggtggtggagaatgaccagggagaggtg
gtcagagagtttatgaaggacaccgattccatcaacctctacaagaacatgagggaaacc
cttgtgtacttgactcacctggactatgcggacacagaacgcataatgacagaaaagctt
cacaaccaggtgaacggcaccgaatggtcctggaagaacctcaacacattgtgctgggcc
atcggatccattagtggggctatgcacgaggaagacgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaaaagaggaaaggacaacaaggccatcata
gcctccaacatcatgtatattgttggccagtatccacgctttctcagagcccactggaag
ttcctcaaaactgtggtcaacaaactctttgagttcatgcatgagacccatgatggtgtt
caggacatggcctgtgacacattcatcaagatcgcccagaagtgccggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacattaacacc
atcatctgtgacctccaacctcagcaggtgcacaccttctatgaggccgtaggttatatg
attggggcccagacagatcaggctgttcaagagcacctgatagaaaaatacatgcttctg
cccaatcaagtgtgggacagcatcatccagcaggctactaagaacgtggacatcttaaag
gacccagagactgtgaaacagctgggtagcatcctgaagaccaacgtccgagcctgtaag
gctgtgggacacccctttgtcatccagctcggtcggatttaccttgacatgctcaatgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtaagggaggtgag
atggtgacgaaacagcccttgatccggagtatgagaacagtgaaacgagagacactgaaa
ctgatctcaggctgggtcagccgatcaaacgacccacagatggttggggagaactttgtt
ccaccgctgctggacgccgtcctcattgactatcaacgcaatgtccccgctgcccgtgag
cccgaggtcctcagcaccatggcaaccatcgtcaacaagctggggggacacatcaccggc
gagataccccagatttttgatgccgtcttcgagtgcaccctgaacatgatcaacaagaac
tttgaggagtttccagagcacaggacccacttcttctacttgctccaagctgtaaactct
cactgcttccctgcattcctcgccatcccccctgcccagttcaaactggtgctggactcc
atcatctgggccttcaaacacaccatgaggaacgtggctgatactggtctgcagattctg
tacacgctgctgcagaatgtggcccaggaagaagcagccgctcagagtttctaccagacg
tatttctgtgatatcctacaacacatcttctctgtggtcactgacacgtcacatactgcc
ggcctgacgatgcatgcgtccatcctggcctacatgttcaacctggtggaggaagggaag
atcactacagtgctaaaccctgccagccctaacaaccagggtttcatccaggaatacgtg
gccaacctgctcaagactgccttccctcacctacaagatgctcaggtgaaggtgtttgtg
accgggttgttcagcttaaaccaggatattcctgcattcaaggagcacctcagggacttc
cttgtccagattaaggagtttgcaggcgaggacaccacagacctgttcctggaggagagg
gaggcgtcacttcgtcaggcccaggaagagaaacacaagatccagatgtcagtcccgggc
atcctcaaccctcacgagatccctgaggagatgtgtgactga
DBGET
integrated database retrieval system
