Sander lucioperca (pikeperch): 116050111
Help
Entry
116050111 CDS
T07345
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116050111 (trdmt1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
116050111 (trdmt1)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116050111 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
CitMHS
Motif
Other DBs
NCBI-GeneID:
116050111
NCBI-ProteinID:
XP_031156002
Ensembl:
ENSSLUG00000015338
LinkDB
All DBs
Position
23:16358781..16379148
Genome browser
AA seq
386 aa
AA seq
DB search
MEGERVPWRVLELYSGIGGMHYALKESGIPAQVVAAIDINTTANQIYGHNFPDTALWNKT
IEGISLEDFNKLSIDMILMSPPCQPFTRLGLQGDVADLRTKSFLYILDLLPRLRRLPRFI
LLENVKGFESSSARERLVKTLVECGYTFHEIMVSPTSVGMPNSRLRYFLIAKISTENFIS
SKILDAFPHPAERDSPEPPTVSSPPCSGTWQPEEGKQGGQVLYKLETTMDAQRKRSQNNN
LSVRQVQDFLQPQTEVNMEDFLLPPKTLLRYALLLDIVRPTCRRSVCFTKGYGRYVEGTG
SVLQCCMETEMDSVFGGLDQCSEEEKLQRLLKLKLRYFTPREVANLMGFPQSFSFPEQIS
TRQQYRVLGNSLNVVVVARLLQLLVS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagcgggtgccatggcgggtgctcgagctctacagtgggataggagggatg
cattatgctttaaaggagagtggcatacctgcccaggtagtggctgccatcgacataaac
accacggccaatcaaatctacgggcacaatttccctgacacggccctgtggaacaagacc
attgagggcatatcactagaggacttcaataaactatctattgacatgattttgatgagt
cctccgtgccagcctttcaccaggttaggacttcagggggacgttgctgacctgagaacc
aagagcttcctctacatcctcgatcttctgccaaggctgcgcaggctgccgcgcttcatc
ctgctggagaacgtcaaaggcttcgagagctcctctgccagggaacgtttggtgaaaaca
ctcgtggaatgtggatacactttccatgagatcatggtctcccctacaagtgtcgggatg
ccaaattccagactgcgttatttcctgatcgccaagatttcaacagaaaacttcatcagt
tcaaagattttagatgccttcccacatcctgctgagagggactcccctgagccgcccaca
gtgtcgagccctccctgctcaggtacctggcagccagaggagggaaagcaggggggtcag
gttctgtataagctcgagaccacaatggatgcccagaggaagaggagtcagaacaacaat
ctgtctgtcaggcaggtccaagacttcctgcaaccacagacggaagtaaacatggaagac
tttctccttcctcctaaaactctgctgcgatatgctctgctcctggacatagtcaggccc
acatgcaggaggtctgtgtgcttcaccaaaggctatgggcggtatgtggagggaactggc
tcagtgctgcagtgctgcatggaaacagagatggacagtgtgtttggaggtctggaccag
tgctctgaagaagagaaactgcagcggctgttgaagctgaagctccgttatttcaccccg
agagaagttgccaacctcatgggcttcccccaaagcttctccttcccagagcagatcagc
accaggcagcagtacagagttctaggcaacagcctcaacgttgtggtggtggccagactc
ctccagctgctggtctcctag
DBGET
integrated database retrieval system
