Sander lucioperca (pikeperch): 116051630
Help
Entry
116051630 CDS
T07345
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04020
Calcium signaling pathway
sluc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116051630 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116051630 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116051630 (grin1b)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116051630 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
116051630
NCBI-ProteinID:
XP_031158015
Ensembl:
ENSSLUG00000004903
LinkDB
All DBs
Position
2:46913980..46978320
Genome browser
AA seq
938 aa
AA seq
DB search
MELRGMLLLTVLQCCSVARGGCEPRLVNIGAVLSHKRYEQVFKEAVSQANTLYGKEKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPSQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQHNFDFRRTPKAEKVLLFSPDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALNEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNWQQKPSRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKTDGTCKEEYTVNGVLIKKVICTGPNGTTPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSRAEPESKTSFRS
ITSTSDLKCRKASGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtggcatgctcctcctcaccgtgctgcagtgctgttcggttgctcgcggt
ggttgcgagccccggctggtaaacatcggtgcagtgctgagtcataaacgctacgagcag
gtgtttaaggaggcggtgagccaggccaacactctgtacggtaaagagaagttcaagatg
aacgccatctccgtcacacacaaacccaacgccatccagatggctctgtccgtctgcgag
gacctcatctccaaccaggtgtatgcgatcctggtcagtcacccttctcagtccaatgac
caccttaccccgacacccgtctcctacaccgctggtttctaccgtatcccagtggtcggc
ctgacgacacgcatgtccatctactctgacaagagcatccacttgtcgttcctgaggaca
gtgcctccgtactcccaccaggctcatgtctggttcgaccttatgagagagttcaggtgg
aaccacatcatcctcatcgtcagcgacgaccacgaaggacgagccgctcagaagagactg
gagacgctactggaggagcgagagaccaagactaaaaacaggaactatgaaaacctcgac
caacacaactttgacttcaggagaacacccaaggcagagaaggtgctgctcttcagccca
gacaccaacctgacggctctgctgctggaagccaaagacctggaggcccgagtcatcatc
ctctctgccagtgaggacgaagctgcagcagtgtataaagcagcccgtcagctcaacatg
accggctctggttacgtctggctggtcggagagagagagatgaccggcaaagctctgaat
gaagctccagatggcctgctgggcctccagctgattaatggtaaaaacgagtcagctcac
atcgcagacgctgtggcagtggtggctcagtctctgcaggagctgtttgagaaagagaac
atcacggagcctccgcggggctgcgtgggaaacaccaacatctggaggacaggaccactc
tttaaacgagtgctgatgtcatccaaatatcctgacggtctgactggacgaatcgagttt
aacgacgacggcgaccgacgctttgcaacctacagcatcctgaactggcagcagaagcca
agtcgcctcgtccaggtcggagtcttcaacggatcacaggttgtgatgaaccctcagagg
aagatcatctggcctggaggagagacagagaaaccagttggataccagatgtcgactaaa
ctgaagattgtaacgatccatcaggagccatttgtttacgtgaagccaacaaagactgat
gggacgtgtaaagaggagtacaccgtcaacggagtcttaatcaagaaggtgatctgtacc
ggacccaatgggaccacaccaggtcagcccatcgtccctcagtgttgctatggtttctgc
attgacctgctcatcaagctggcgatgagcatgaacttcacctacgaagttcacctggtc
gctgatgggaaatttggcacgcaggagcgcgtgaacaacagtaacaagaaggagtggaac
gggatgatgggggagctgttgggaggtctggccgacatgatcgtcgctcccctcaccatc
aacaacgagcgtgctcagtacattgagttctccaaaccctttaaataccaggggctaacc
atcctcgtcaagaaggaaatccctcgcagcactctggattcattcatgcagccgttccag
agcacactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ttagaccggttcagcccgtttggaaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccctgtcctctgccatgtggttctcatggggagtactgttgaactctgggata
ggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcaggtttc
gctatgatcattgtcgcatcatatactgccaacctggcagccttccttgtgttggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttc
atctacgccacagtgaagcagagttcggtggatatctacttcagacggcaagtggagctg
agcaccatgtaccggcacatggagaaacacaactacgagagcgctgctgaggccatccaa
gccgtcagagacaataagcttcatgccttcatctgggacagcgctgtgttggagttcgag
gcatcacagaagtgcgatctggtgacgacaggagagcttttctttcgctccggatttggg
attggaatgaggaaagacagtccatggaaacagaacgtttctttggctattctcagctct
catgagaatggcttcatggaggacctggacaagacgtgggttcgataccaggagtgtgac
tccaggagcaacgcccccgctacccttacgttcgagaacatggcaggtgtgttcatgctg
gttgccgggggcatcgttgccgggatcttcctcatcttcatcgagatcgcgtacaaacga
cacaaagacgctcgaaggaaacagatgcagctcgccttcgctgctgtgaacgtctggagg
aaaaacctgcaggataggaaaagtagagcagagcccgagtccaaaacctcttttaggtcc
atcacttcgacctccgacctcaaatgccgtaaggcctccggggatgccacgccgtacccg
actgacatcactggccagctcaacctatcagatccttccgtcagcaccgtggtctaa
DBGET
integrated database retrieval system
