Sander lucioperca (pikeperch): 116057748
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Entry
116057748 CDS
T07345
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116057748 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116057748 (tpra)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116057748 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
116057748
NCBI-ProteinID:
XP_031166210
Ensembl:
ENSSLUG00000025556
LinkDB
All DBs
Position
9:22233823..22266680
Genome browser
AA seq
2500 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDIDKR
LAESQEQILSATKDLQTLKEENKKLNEELSTLKGIEGETSEDKPPQQQTKAKYEIEAEKR
ELARMLEKRTQEVENLSEDVKRLNEKLTETSKVKMELQLKLDDVQSSEASVQHREKRMEQ
EKELQEKKVEWLTTQLKTKTEELLNTNREKGKEILELRGGLRNSKEQVTRLERQLTSLKQ
TSESQSKRAEDLNNKLKQSKDEQSSMEEKYRNELNAHIKLSSLYKGSATDMETKNQELSR
ALEELSKLVKETGEANKALEKKVSEGEELKKRLEAELGEKVKKMEKELENATMKAAGKHC
CVPSLSEEQLDTMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETRRVSRVLDE
IVQEIESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEEAKQRCDTMERD
KMRIERQLEDTSAQVCSLLVDLEEARGNQVTREDGSSANISSTSEVISSRQLSFRSVEQL
QRQNQSLLSRLRQLEEEKDRQQSQVTSARVSELEASVDKLEKDVEQLKEQRNQQKQLADS
NARQRDMYKVLLTQSTGFSLPTQGSDSSSHPAHVRPSVPATRSTPQRAAAAESAQTAQAK
AALKQLNDAFTLYKKEKAENDKMSNETNDRLQKQLTDLRSSHAKLTSQLEFSSKRYEMLQ
DTVAAYRREISALQDRNQKMAATAQRHEHIIHTMSQDLRQANEKLALEEVRVENLTKERD
MLRQAESRLCREKEAMLAEQRNQNLLLTNLKTIQLTMERTETETRQQLNNKIEHLEAELS
SMKTRLDQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRSSEQQVAALKAQLA
SAPSEAVTTSSTAANPATRTAGLRAPLRVRSPGPAAAQQLSQSEQELAELKGLLRTAEEQ
NNELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLELRLKESQEVQKQLEKRILEL
EKMKQQEREERRKAVDAVEKQMYEVQRSLKSSQAEQQEALERATSAVTLEQKAIQESLLQ
TKLAGEAQAKYERELMLHAADVEALQELKKKTQQDAAQKRELEEQLSKISSLLQEKTAAL
NTVERQLKEDLSNKSRRCEELGKQNALLHQQMDEMATKGRLLQNQPQQLDLSFSEEGKTT
EQILEILRFVRSEKEIAVARCDASDREALRYKQRVEHQDRQLKELEEALNSEREKMQATA
KTLAQQEEQLKKMENIAALQETNRMLKMDRDKLEQELQQAQAKVTKLQSDISPLHHSLSQ
LSERNGSLQADKRILEEDLKRWKAKTQQLLSQQKDGDVEERQKLATEKEAQQKRITQLAE
ETAKLKTDLARSSASSNSAQSQLQALRDSVARLTAERDTLKKDVETQKADILEKNKTITQ
VKKIGRRYKTQYEELKVQHDKLVEETAAKAGSEAGPSQEVQQELTKTQEERNKAREDLNT
LKAELQKKLEEAQKSQQEFEEYKKENQQTVEKLQETETQLQQNQNLLTQAQKDLQQTKTH
SQQVQNQLKLAQSQAQARQNQIQQIQRELQQAKEALQQNLANQKELQRTQQSSQQSHNQE
ISNIKTALSQAESKVTELQSQLDSLQKIIGEREADIKRLQEQLTEANQANEASRATQANQ
SQSSPSIQASDANVASDSNQALQDELAKLRQELSESKNREEQLRQQIAEKEEKTKKVFMG
AKTKINQLNSDKEKLTQEIQEVKQNKEELEVRMNALKSQYEGRLLRLDRELRELRETQAQ
SDPREEPQDQSGAKVGDQTRSADQRQISLKSPAQDRGSSSLSDPPTANIRPTTSTPSPSN
KPSPSPGNKATPRASIRPMVTPATVPIPTPTATVMPTTQTDSQEVLMSAGASVHSTSSSL
VNTATSITQPTSTQATAFVQPTQQQAASQDAGPSVEAERPSTSSSVGGTGSKRGREDEEE
ESRPESSHTPPTTKKLRLKPTIALQMEGDEDIEGELRDEGERQDSPDDSQEIPEDCYPAL
AEDDEDIEEVSQSVPSDMMSSQGSAIVRDVIVIDTDSESRESKEGEEKQEDEGEEEEEEE
DEEEEAGYKEEEEDDEDEDDAGHSGIRGGEESNEESREAEEEAGEDEPSEASNTEDNVYG
ASSDSQRPSEPPHSNEGSSSATSESEPPRDPVHFPPTSSPSAPSPCSSITPRLPHPRRPP
HPPPRLYIQPPAPELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTP
TLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGGLGMYES
PLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTTSTGMASAA
DDGDEVFMEQEGEGPGIESSLDSQTDMESTGQQSDDASLPSTSQDPDTSSGTQRRTVSSL
ISGLSGRGTRGGRVEARTLLTRRGTFSRGRGGAMGRGGIA
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcggacggagttaaataaactcccgaaaggc
gcccagaacaagctcgagaagtttgtaacagagctgcaaaatgctaacgaggcgctcagg
acgcagcatgagcggttcaaagcagacagtgaacagcagtactttgacattgacaagaga
ctggcagaaagtcaggaacagatcctgtcagccaccaaagacctgcagacactcaaggag
gaaaataaaaaactcaatgaagagctgagcactctgaagggaatagagggagagacctct
gaagataaaccaccacaacagcaaaccaaagccaagtatgagattgaggcggagaagaga
gagctggcgaggatgctggagaagagaacacaggaggtggaaaacctcagtgaggatgtg
aagcgtctgaatgagaagctgacagaaaccagcaaagtgaagatggagctgcagttgaaa
ctggatgatgtccaatcatctgaggcttctgtacagcaccgagagaagcgaatggaacag
gagaaagagttacaggagaagaaagtcgagtggttaactacacaactgaagaccaaaact
gaagaactgttgaacaccaacagagagaaaggcaaagagatactggaactacggggtggt
ctgaggaacagcaaggagcaggtgaccaggctggaaagacaactcacctctctgaagcaa
accagtgaaagtcagagtaaaagagccgaagacctcaacaacaaactgaaacagtctaaa
gacgagcagagttccatggaggagaaataccgcaacgagctcaacgctcatatcaagttg
tcttccctctacaaggggtcagcgacagacatggagacaaagaatcaagaactgagcaga
gcattggaagagctcagcaagctggttaaagaaactggggaagccaataaggctctagaa
aagaaggtgtcggagggagaagaactgaagaagcgacttgaggcagagcttggagagaag
gtcaagaaaatggagaaagagctcgaaaacgccacaatgaaggctgctggcaaacactgc
tgtgtgccctctctgagtgaggagcagttggacaccatgtgtccatcagcagctgccatt
gctgccattgtcaagcccggcatgaagttctttgatctgtataatgcgtatgcagaatgt
cagacccaccttcagcttgagaagcaggagaccaggagagtgagcagagttctggatgag
attgtacaggagatagagtccaaggctcctgtcctcaagcgtcagcgagaggagtacgag
agcatgcagagatccatggcctctctgtgcaacaagctggaacaggctcgaacggagatc
tacagtttgcagaaagagaaagaggaggccaagcagcgctgtgatactatggagagagac
aaaatgaggatagagagacagctagaggatacatctgcacaggtgtgttctcttctggtg
gatctggaggaagccagagggaaccaggtgaccagggaagacggcagctccgccaacatt
tccagcacctctgaggtcatcagttcacgccagctgtccttccgcagtgtggagcagctg
cagaggcagaaccaaagtctgctgagcaggctgaggcagctggaggaggaaaaagacaga
cagcagagccaagtgacatcagcgcgtgtgtcagagttggaggctagtgtggacaagctt
gagaaggacgttgagcagctgaaagagcagaggaaccagcagaaacagctggctgactcc
aacgccagacagagagacatgtacaaggtcctgctgacacagagcaccggcttcagcctg
cctactcaaggttcggattcttcatcccacccggcacatgttaggccttcagtcccagct
actcgctctactcctcagagagctgctgctgctgagtcagcccagactgctcaggctaaa
gctgctttaaaacagctgaatgatgccttcactctgtataagaaggagaaggcagagaac
gacaagatgtcaaatgagacaaacgacaggctccagaagcagctgacggatcttcgctcc
agccacgccaagctgacctctcagctagagttcagcagcaagaggtacgagatgctccag
gacactgtagcagcctaccgcagagagatctctgccctgcaggacaggaaccaaaaaatg
gctgcaacagcccaacgacatgagcacatcattcacacaatgagccaagacctccgacag
gctaacgaaaaactggccctggaagaggtgcgagtggagaacttgactaaagagagagac
atgttgcgacaagcagagagtcgactctgtcgagaaaaggaagccatgctggctgagcaa
cgtaaccagaacctgctgctcaccaatctcaagactatacagttgactatggagcgtaca
gagacagagactcgccagcagctgaacaacaagatagagcatctggaggcagaactgtct
tcaatgaagaccaggctggaccaggaagtagcacagagacatgcccttggacgtaccatg
gatgctcagttattagaagctaaaaaacagctggagacacagaacaccttgcagcagaag
accagggagttgttacgtagctctgaacagcaggtggcagcactgaaagcccagctggct
tctgctccctctgaggctgttaccacctccagcaccgcggccaaccctgctaccagaact
gcaggcctcagggcaccacttagagtacgctctccagggcccgcagccgcccagcagctc
agccaatcggagcaggagcttgcagagttgaaaggtcttctgcgtactgctgaggaacaa
aacaacgaactggcagagcagctaaagaatgccaatgctactgtagagcagtacagggct
gtggtactgactctggaagacagtctgaagaaagaaaaggagtctcgctcccctcttgag
ctgcggctgaaggagtcccaggaggtgcagaagcagctggagaagaggattttagagttg
gagaaaatgaagcagcaggagagagaagagaggagaaaggctgtggatgcagtggaaaaa
caaatgtatgaggtgcagcgcagtctgaagtccagccaggcagagcaacaggaggcactg
gagagagctacctctgctgttacactggagcagaaggccatacaggaaagcctgctgcag
actaagctagctggagaagcacaggctaagtatgagcgggagctcatgcttcatgctgct
gatgtagaggccctgcaggagctgaagaaaaaaacccagcaagatgcagcacagaagagg
gagttggaggagcaactgagcaaaatctcatccctcctgcaggagaagactgcagctttg
aacacagtggagagacagctgaaggaggatctgtctaataagagtcgtcgctgtgaggag
ctggggaagcagaatgctctcctgcaccagcagatggatgaaatggccactaagggtcgt
ctgctgcaaaaccagccacagcagcttgacctgtcattcagcgaagagggcaagaccact
gaacagatactagaaatactcaggtttgtgcggagtgaaaaggagattgctgtggctcgg
tgtgacgcgtctgatagagaagctcttcgctacaaacagcgagtggagcaccaagacaga
caactgaaggagctagaggaagctctgaactctgagcgggagaaaatgcaggctacagcg
aagactctggcccagcaggaggaacagctgaagaagatggaaaatatcgctgctctccaa
gaaaccaacaggatgctgaaaatggaccgagataaactggaacaagagctgcaacaagct
caggctaaagttacaaagctccagtcagacatcagcccactacatcactctttgtctcag
ctgtcagagagaaatggctccctgcaggctgataagagaatactggaagaagacctcaaa
cgctggaaggccaaaacacagcaactgcttagccaacagaaagatggcgatgttgaggag
agacagaaactcgccactgagaaagaagctcagcagaaacgcatcacacagctagctgaa
gagacagccaagctgaagactgatctggcaagatccagtgccagcagtaactccgctcag
tctcagctgcaagccctcagagactccgtggcccgtctgacggcggagagagacactctg
aagaaagacgtggaaacacaaaaagcagacattctagagaagaacaagaccataacccag
gtcaagaagattggacgacgctacaagacccagtatgaggagctcaaagtccagcatgac
aagctggttgaggaaacagcagctaaagcaggaagtgaggcaggtccgagccaggaggtg
cagcaggagctgactaaaacccaggaggagcgcaataaggccagagaggacctaaacaca
ctgaaagcggaattgcagaaaaaactggaggaggcccagaagtcccagcaggagtttgag
gagtacaagaaggaaaaccagcagaccgtggaaaagttgcaggagaccgagactcaactg
cagcagaatcagaacctgctgacccaggctcagaaagaccttcagcaaaccaagacccac
agccagcaggtacagaaccaattaaaattggctcagtctcaagctcaggcccgtcagaac
cagattcagcagattcagagggagctccagcaggctaaagaagcccttcagcagaacctc
gctaatcagaaagagctgcagcggacccaacaaagcagtcaacagagccacaaccaggaa
atcagcaacatcaagactgctctcagccaagcagagagcaaggtgactgagcttcagagc
caactggacagcctgcagaagataattggtgaacgtgaagcagacattaagcgtctgcag
gagcagctcactgaagccaaccaggctaatgaagctagccgagccacacaggccaaccag
agccagagttccccgtccatccaagccagtgatgctaacgttgctagtgacagtaaccag
gcgctacaagatgagctggctaaactcagacaagagctgtctgagagcaagaacagagag
gagcagctcagacagcagatagctgaaaaagaggaaaagactaaaaaggtctttatgggg
gccaaaaccaaaatcaaccaactaaacagtgataaagagaagctcactcaggagatacaa
gaagtgaaacagaataaggaggaactggaggtgagaatgaacgccctaaagtctcagtat
gaaggacggcttcttcggctggacagagagctgagagaactgagagagacgcaagcacag
tccgaccccagagaggaaccacaggaccagagtggagctaaggtgggtgatcagaccaga
tctgcagaccagagacagatatctttgaagagtcctgcccaagacagggggagctccagc
ctgtctgaccctcccactgccaacatccgccccaccacaagtactccatctcctagcaac
aagccaagcccctcccctggtaacaaggccacaccccgcgccagcatccggccaatggtt
accccggcaactgtccccatcccaactcctactgccacggtcatgcctaccacacagact
gacagccaagaggtgctgatgagtgcaggagcctctgtacactctaccagctccagtctg
gtgaacacggccacatcaataactcagccaaccagcactcaggccaccgcttttgtccag
cccactcagcagcaggcagccagtcaggatgcaggccccagtgtggaggcagaacgacca
tctacgtcctcctctgtgggtggaacaggttcaaagcgaggcagagaggacgaggaagag
gagagcagaccagagagttcacacacacctccaaccactaaaaaactacggcttaaacca
acaatagcactgcagatggaaggtgatgaggatattgaaggagagctgagggatgaagga
gaacgacaggactcaccagatgacagtcaggagattccagaggattgttaccccgcttta
gctgaagatgacgaagacatcgaggaagtgtcccagtctgtcccctctgatatgatgtcc
tctcagggctccgctattgttcgggacgtcatcgtgatcgacacagacagcgagagccgt
gagagcaaagagggggaggagaagcaggaggacgaaggtgaagaggaagaggaggaagaa
gacgaagaagaagaagcggggtataaggaagaagaagaggatgatgaagatgaggatgat
gctggtcacagcgggataaggggaggagaggagagtaacgaggagagcagggaggcagaa
gaggaagcaggggaggatgagccatcagaagcctccaacactgaggacaatgtgtatgga
gcctcttcagactcgcagcgtccctctgagccgccacacagcaatgaaggcagcagtagc
gccacatcagaatccgagccccccagagaccctgttcacttccccccaacctcctccccc
tctgcaccctccccctgctcctccattacaccccgcctgccccacccacgtaggccccca
caccccccaccacggctctacatccaacctccagctccggagctgggacccccacacaca
cagagacagtcctctcagctgcgcagaccatcagtaggacgcggacctcagctgaccccc
ggaataggcagtatgcaacatttcttcgatgatgatgacagaatggttcccagtactccc
actctggtagtcccacaccgtactgatggctttgctgaagctatacattctcctcaggta
gcaggtctgtccaccaggttcaggtttggacctccagaagacctgctgcctcagacatca
gcctcacactctgacctgggacagcttgcctctcaaggaggtctggggatgtacgaatct
cctctgttcctggctgctcatgatgaagacggaggaggaaggagtgtccccaccacgcct
ttacaagtggctgcaccagtgacggtcttcacagagtctctgccctcagacagtggtgac
aacatggcatcccagtcggttcccatggtaaccacctccaccgggatggcctctgctgca
gatgatggagatgaagtcttcatggagcaggaaggagagggtcctggtattgaatcctct
ctggatagccagacagacatggagtcaacaggacagcagagtgatgatgcatcactgcca
tctaccagccaagaccctgacaccagcagtggtactcagcggcgcacagtgagcagtttg
atcagcggcctgtcaggcagaggaaccagaggagggagagtcgaggccaggacgttactc
acgcgcagaggtactttctctcgtggaaggggaggagccatgggcagagggggcatcgcc
taa
DBGET
integrated database retrieval system