Sander lucioperca (pikeperch): 116061373
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Entry
116061373 CDS
T07345
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X2
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04020
Calcium signaling pathway
sluc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116061373
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116061373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116061373
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116061373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
MatE
Motif
Other DBs
NCBI-GeneID:
116061373
NCBI-ProteinID:
XP_031171398
Ensembl:
ENSSLUG00000001252
LinkDB
All DBs
Position
22:20308767..20362194
Genome browser
AA seq
1389 aa
AA seq
DB search
MVIPRGHPPPSPWPPLFLLLLISSPLPLQARPLLLHPSINVAVVFSGSSYQNEVRGRLSG
ENFVDLPIVVSPVTVLVNDTNPRDLLTRLCETMATERLHAVVFEDDVGSGADTQVAEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGVSLEQQIVCMFKIMEEYDWGEFA
VITSLLPGYDTFVDIVQSYTDTSYFLWNLQDVLSLEMSVGSNDGRTKRMLQQVDSQVLMA
YCSYEEAQYLFQQAAEVGLLGPGYIWILTSQAVGNPDSPPPDSFPVGVIGVITDQGRKSL
RQRVREGVAIVAKGAESFQKQYGFIPEGHGDCNKPAKHLDNNTLFRHMLNVTWERKDLSF
NNQGFLSNPSMVIIALDRDRLWDKVGTYARGILQVRYPVWPRYGSFLEQVSDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNQTESIIGHSGSYIKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYLSPVGYNRSL
VSAKSPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKY
NQKGVEEALESLKNGKLEAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSMLVFAWEHLLYWKLRHSLRKSPKLDFLLAISRGIYSCFNGMEDPGRSSGLAKPDLTS
NYAQANMLKMLRTAKGLVSTANVETSLDNATKTIEQLSRHGGSLPVRIPQVATEAVPGGF
AYITENHCSLTPPLTAVTSLKQQRGVTRPTPLRYTLPTRSSSCLYDRPLPVSSLSSPHLA
VGEPLPHQHPHHYQTTGRLYIDTHPHSPFIPYTDLQLPDIYASHPVSLSQNQYVQGDFSR
RKRRSKSFQCEDEDAGRRKLRDQGKNDKSPIYLSELKANHLQDNHISAPSIDNIYSGEGM
CPRVENYRSWPPEDLVLRGRRRHRRPSFLKATWGNEQIRQLDESQSSLSSQSPSTLPDLF
PCTLTPTTPAKACNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQKLRYSHSAHLPTYG
EAVRHGTGLGRGMVRRATSLLSRQYTHYLNSYPGLPLYHGPLDLHNHSQASSSHPSTSPV
CQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGSEAQAGKGAGGQPVGSPCVLRPWR
RVSSLESEV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtcattcccaggggacatcctcctccctctccttggcctcctctcttcctcctgctc
ctcatctcctccccgctccccctgcaggcccggccactcctcctccacccgtccatcaat
gtggcggtggtgttcagtggctccagctaccagaatgaggtcagaggtcgtctcagcggg
gaaaactttgtcgacctgcccattgtggtcagcccagtgaccgtgctggtcaatgacacc
aacccccgcgacctgctgacacgcctctgcgaaaccatggcaacggagaggctgcacgcc
gtagtgtttgaggatgatgtgggctctggtgcagacactcaggtggcagaagtggcacag
atcctggacttcctctccactcagacagctctgccaatcgtaggcatcagtggtggctct
gcagttgtcataccatacaaggctgagggatcctccttcttgcagatgggagtgtctctg
gagcagcagattgtctgcatgtttaagatcatggaggagtatgactggggcgagtttgca
gtgatcaccagcttgctgccaggctacgacacctttgtggatatagttcagtcctataca
gatacctcctatttcctgtggaatctacaggatgtcttgtctctagaaatgtctgtcggg
tcaaatgatgggaggacgaagcgcatgctgcaacaggtggactctcaggtcctgatggcg
tattgctcctatgaggaggcacagtacttgtttcaacaggcagctgaggtgggtctgctg
gggccaggctacatctggatcctcaccagtcaggccgtgggcaaccccgacagccctcca
cctgacagcttccctgtcggtgttattggtgtgattacggaccaggggagaaagagcttg
cggcagagggtgagggagggtgtcgccattgtagctaaaggggctgagagcttccagaag
cagtacgggtttattcctgagggacatggtgactgcaacaaacctgctaaacacttagac
aacaatactctgttcagacacatgctgaatgtgacgtgggaaaggaaagatctttcattc
aacaaccaaggcttcctctccaatccttccatggtcattatcgctctggaccgggataga
ctctgggacaaggtgggtacgtacgcccgagggatccttcaggttcgctacccggtctgg
cctcgatatggcagcttcctggagcaggtgtctgatgaccgtcacttgactgtggccacg
ctggaggagcatcccttcgtcatggttgagaatgtggacccgggcactggtacatgtgtc
cgtaacacggtgccctgcaggcggcagtccaatcaaacagagagtattatcggccattca
gggtcctacatcaaactgtgctgtaagggcttctgcatagacatattgaagaaactgtcc
cgcaccatcaagttctcctatgacctctacctggtcaccaacgggaaacatggcaagctg
gttcgtgggacttggaacggcatgattggggaggttgtgtatagacgagctgacatggcc
attggctctctcactatcaatgaggagcgttcggaaatcatcgacttctccgtaccgttt
gttgagacaggcatcagcgtcatggtagcccgcagcaatgggacagtttccccatctgcc
tttcttgagccctacagcccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtg
gtggcggtgacggtttttgtgttcgaatacttaagtccagtcggctacaaccgcagtctg
gtcagcgccaaatctcctggtggtccgacgttcaccattgggaagtcagtgtggctgttg
tggggcattgtcttcaacaactcggtccccattgaaaaccctaaaggaacaaccagtaag
atcatggtcctggtctgggccttctttgctgtcatcttcctggcctcttacactgccaac
ctggctgccttcatgatccaggagcaatatatcgacacagtgtctgggctctctgacaag
aagttccagaaaccacatgagcattaccctcctttccgcttcgggacggtcccaaacggg
agcacagagaggaacatccgcagcaactaccccgacatgcacacacacatgataaaatac
aaccagaagggggtggaagaagctctagaaagcctcaaaaacgggaagctggaagctttc
atctacgacgctgctgttttgaactacatggccgggaaggacgaaggctgcaagctggtg
accatcggcagcgggaaagtgtttgccaccacaggatacggcattgctctgcagaaggac
tcccgctggaaacggcctattgaccttgcactgctgcagttccttggagacggagacacc
cagcgcttggagacggtgtggttgtcaggcatctgccagaacgaaaagaatgaagtaatg
agcagcaagctggacattgacaacatggcaggcgtcttctacatgctgctagtggccatg
ggcctcagcatgctggtctttgcctgggaacaccttctttattggaaactacgacactcc
cttcgcaagtctcccaaacttgacttcctgttggccatcagtaggggtatttacagttgt
ttcaatggaatggaggatcctggacgttcatctggtttggcaaaacctgacctgacctcc
aactacgctcaagcaaacatgctgaagatgcttcgcactgccaagggcctggtctccact
gctaatgttgagacctctctggacaatgccaccaagacgatagagcagttgagccgtcat
ggcggcagcttgcctgttcgtattccacaagtcgccactgaggccgtgccaggaggattt
gcttatattacggagaatcactgctccctaaccccacctctgactgctgttacctctctg
aaacagcagaggggtgtgaccaggccgacgccactgcgctacacactcccgactcgctct
tcttcatgtctgtatgaccggccacttcctgtgtccagccttagcagcccccacctggct
gtgggtgagccgcttcctcatcagcacccgcaccactaccaaaccacagggagactctat
atagacacccatcctcactcgcccttcattccctacaccgatctccaactacctgacatc
tacgcgtctcacccggtctccttgtctcaaaaccagtatgtccaaggggacttctcccga
cggaaaaggaggtccaagagtttccagtgtgaggatgaggatgcagggaggagaaaactc
agggaccagggaaagaatgacaaaagtcccatctatctgagtgagctcaaagccaaccac
ctccaagataaccacatctccgcccccagcattgacaacatctattcaggggaggggatg
tgtcctcgggtagagaactacagatcctggcccccggaggacctggtgctgagaggcaga
cgcaggcaccgccgcccctctttcctcaaagccacatggggcaacgagcagatacgccag
ctggacgaatcccagtcatccctgtccagccaatcaccttccaccctgccagacctgttc
ccatgcactcttacaccaaccacacctgcaaaggcctgcaaccctgctcaccttcgaaac
aacctgtgcctcccccggaaccaggcctacctccacataagggaggaccagaggaggccc
aatgggcgtaagggccagaagctgcgctactctcactccgcccacctccccacgtacgga
gaagcagtgcgacatgggactgggttagggcgggggatggtacggagagccaccagcttg
ctcagcagacagtacacccactacctgaactcataccctggactacccctctaccacggg
cccctagacctgcacaaccacagccaggcctccagtagccacccgagcaccagcccagtg
tgccagctgctggcttgtgggggtgggagatgtggaagccagcgggctctgctgtaccag
gacagtgtgtatggggcctatggggtctatcagggatcccagactggatcagaggcccag
gcaggtaagggagcaggaggccagcctgtggggagcccctgcgtacttcgtccctggcga
cgggtgtccagcctggagtctgaggtctga
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