Streptomyces lividans: SLIV_28480
Help
Entry
SLIV_28480 CDS
T03222
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
slv
Streptomyces lividans
Pathway
slv00860
Porphyrin metabolism
slv01100
Metabolic pathways
slv01240
Biosynthesis of cofactors
Module
slv_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SLIV_28480 (cobD)
Enzymes [BR:
slv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
SLIV_28480 (cobD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Phage_holin_3_3
Motif
Other DBs
NCBI-ProteinID:
AIJ16604
LinkDB
All DBs
Position
complement(6365705..6366688)
Genome browser
AA seq
327 aa
AA seq
DB search
MRAGRVFAYGAAAGLLGDLLLGDPRRGHPVAAFGRAAGAVERVLWRDHRGWGALHTVVCA
GGAAVLGSAAAHAVRRSPAASVALTAAATWSVVGGTSLAREATAIGRALEAGDVEAARAR
LPHLCGRDPQALDADGIARAVVESVAENTSDAVVGALVWGAVAGVPGLLGFRAVNTLDAM
VGHKSPRYRRYGWASARLDDLAGWPGARLTAVLTTVAGGAPRGAVRAWRADAAQHPSPNA
GPVEASFAGALGVRLGGTLSYGGRVEHRPVLNGAAGRAVRAGSGDIDRAVRLSRRVGWLA
LGVCAGARLLARRAAAKNPGVTKGRTS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgccggacgcgtcttcgcgtacggcgccgccgccggcctcctcggtgacctcctc
ctcggcgatcctcgccgcggacacccggtcgccgcgttcggccgtgccgcgggcgccgtg
gaacgggtgctgtggcgggaccaccggggctggggtgccctgcacaccgtcgtgtgcgcc
ggcggcgccgccgtcctcggctcggccgccgcgcacgccgtacgccgctcccccgccgcc
tccgtcgcgctgaccgccgcggccacctggtcggtcgtcggcggcacctcgctggcccgc
gaggccaccgcgatcggccgggccctggaggccggcgacgtcgaggcggcgcgggcgcgg
ctgccgcacctgtgcgggcgggacccgcaggcgctggacgccgacgggatcgcccgggcc
gtcgtggagtccgtcgccgagaacacctcggacgcggtggtgggcgccctggtctggggc
gcggtggccggggtgcccgggctgctcggcttccgggccgtgaacacgctggacgcgatg
gtcggccacaagtcgcccaggtaccgccgctacggctgggcctcggcccgcctcgacgac
ctcgcgggctggccgggcgcccgcctcaccgccgtgctgaccaccgtggcgggcggcgcc
ccgcgcggcgccgtacgggcctggcgggcggacgccgcacagcatccgagtcccaacgcc
gggcccgtggaggcctccttcgcgggcgccctcggcgtgcggctcggcggcacgctctcc
tacggcgggcgggtcgagcaccggcccgtcctcaacggcgccgcgggacgcgccgtacgg
gccggttccggcgacatcgaccgtgccgtacggctgtcccggcgcgtgggctggctggcg
ctgggcgtgtgcgcgggcgcgcggctgctcgcgcgccgggccgccgcgaagaacccgggt
gtcacgaagggacgtacctcatga
DBGET
integrated database retrieval system
