Solanum lycopersicum (tomato): 101245486
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Entry
101245486 CDS
T02665
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101245486
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101245486
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
101245486
NCBI-ProteinID:
XP_010326345
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All DBs
Position
1:complement(3813312..3816686)
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AA seq
322 aa
AA seq
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MIYGVTFFGPCKGSLIVKIQGVIKASTNPNIFCKGSWISFEHINNLEIKGGGTLDGEGAS
AWGQSQCATRPYTIGLSSIQNAIVHGIHSINSKMFHFDIYNSNNVTLSHVHIIAPSDSPN
TDGIHISLSSNIRVFDSNIGTGDDCISIFAGSQNVNISRVTCGPGHGISIGSLGNKPNEV
VKDVHVKNCTLIATQNGMRIKTWASSNVGAATNIYFEDILMDKVDNPIIIDQYYCPSHTC
NIKKSLVQIKGVTFNNIRGTSSSLVAVNFNCSSSLSCQKINLNDIDLINYNTKPTIASCA
NAIGHATGIELPPSCLKSVLES
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatatatggtgtaactttttttggaccatgcaaaggatccttaattgttaaaattcaa
ggagttattaaagcttcaacaaatcctaatatattttgcaagggttcttggatttctttt
gaacatataaataacttagagattaaaggtggtggaactttagatggtgaaggagcttct
gcttggggacaatctcaatgtgcaactcgtccttatactattggattgagttctatccaa
aatgcaattgtgcatggtatacactctatcaatagcaagatgttccattttgatatctat
aattccaataacgtgacattaagtcatgtacatataattgcaccaagtgatagtcccaac
actgatggaattcacattagtttatcgtcgaatattcgagttttcgattcgaatattggt
actggagatgattgtatatctatatttgctggaagtcaaaatgttaatatttctagagtc
acatgtggtcctggccatggaataagcattggaagcttagggaataaaccaaatgaagtt
gttaaagatgtacatgtgaaaaattgtactcttattgctactcaaaatggaatgaggatt
aagacttgggcatcatcaaatgttggtgcagctacaaatatatattttgaggatattcta
atggacaaggtggataatcctattattattgatcaatattattgtccttcacatacttgc
aatattaagaaaagcttagtgcaaatcaagggtgtgacattcaacaacataagaggaact
tcaagttcattggtggcagtgaattttaattgcagttcttcattatcttgtcaaaaaatt
aatcttaatgatattgatttgattaattataatactaaacctacaattgcatcgtgtgct
aatgccattggacacgccaccggcatcgagttacctccgagttgcttaaagtctgttctt
gaatcttaa
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