Solanum lycopersicum (tomato): 101256637
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Entry
101256637 CDS
T02665
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03030
DNA replication
sly03410
Base excision repair
sly03420
Nucleotide excision repair
sly03430
Mismatch repair
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101256637
03410 Base excision repair
101256637
03420 Nucleotide excision repair
101256637
03430 Mismatch repair
101256637
03440 Homologous recombination
101256637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101256637
03400 DNA repair and recombination proteins [BR:
sly03400
]
101256637
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101256637
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
101256637
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
101256637
MMR (mismatch excision repair)
DNA polymerase delta complex
101256637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
101256637
NCBI-ProteinID:
XP_004249349
LinkDB
All DBs
Position
10:62479296..62500702
Genome browser
AA seq
1086 aa
AA seq
DB search
MNSGNSKKRSAAATPSPQQQQKHHAAMEEEDLDEDVFLEETLLQYEEDSQVLRELEESNS
IKERLQKWKRPSLSQAYIAQTQSISFQQLEIDYIIAESHKELLPNSSGQAAILRIFGVTK
EGNSVCCHVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREANRNSNAPKFVRRIEVVQ
KRSIMYYQQQASQPFLKIVVALPTMVTSCRGILDRGIQIDGLGMKSFLTYESNVLFALRF
MIDCNIVGGNWIEVPVGKYKKAARNLSYCQLEFDCLYSDLISHSPEGEFSKMAPFRILSF
DIECAGRKGHFPEPTQDPVIQVANLVTLQGQDQPLIRNVMTLKSCSPIVGVDIMSFDTEK
EVLRAWRDLIREVDPDIIIGYNICNFDLPYLIRRAEVLGMAEFPVLGRIRNSRVRVKDAT
FSSRQHGTRESKEITIEGRVQFDLFQAVQRDYKLSSYSLNSVSAHFLNEQKEDVHHSIIS
DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKV
LSQLLRKAKQKDLVIPNAKQVGSEQGTFEGATVLEAQAGFYEKPIATLDFASLYPSIMMA
YNLCYCTLVTPEEVRKLNLPPECVNKTPSGETFVKSTLQKGILPEILEELLTARKRAKAD
LKEATDPRVKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKK
LVEDKFTVLGGYEHNAEVIYGDTDSVMVQFGVPTVEEAMKLGREAADYISGTFIKPIKLE
FEKIYYPYLLISKKRYAGLLWTNPDKHDKMDAKGIETVRRDNCLLVKNLVTECLYKILVD
RDVPGAVQYVKNTISDLLLNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT
APSIGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPIL
KNASKELLHGDHTRSISVPTPSNSGIMRFAKKQLTCIGCKTPLSGSDRTICKHCKGREAE
LYCRSVANVAELENLFGKLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKTQ
LDRWNF
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaactccggcaactctaagaagcgatcggcggcagcaacgccgtcgcctcaacagcag
cagaaacaccacgcagccatggaagaagaggacctagacgaggatgtatttctcgaagag
acattgcttcagtacgaagaagattcacaggtccttcgtgagctcgaagagagcaattcc
ataaaggagaggcttcagaagtggaaacgtccttctctatctcaagcttacatcgctcag
acacaaagcatatcgtttcagcagctggaaatcgactacattattgcagagagccataaa
gaattgctacctaattcttctggtcaggctgccattttaagaatcttcggggtcacaaag
gaaggaaatagcgtctgttgtcatgtacatggatttgaaccatacttctatatcagctgc
cctcctggaatgggccctgacgatatctcccgttttcaccaaattcttgagggtaggatg
agagaggcgaataggaacagcaatgcccctaagtttgtccgtcgcattgaagtagttcag
aaaagaagcatcatgtattaccaacagcaggcttctcagccttttctcaagattgtagtg
gcattgccaacaatggttaccagttgccgtggtattctcgatagaggtattcaaattgac
gggcttggtatgaagagctttcttacctatgaaagtaatgttctttttgctcttcgcttc
atgattgactgcaatattgttggtggcaactggattgaagttccagttgggaaatacaag
aaagctgcaagaaatctctcctattgtcaattagagtttgattgtctctattctgacttg
ataagccattctcctgaaggagaattttcgaagatggctccatttcgcatattgagtttc
gatattgaatgtgctggtcgtaaaggccactttccggagcctacacaagatcctgttatt
caagtggccaatctggttaccttgcagggacaggatcagccattaattcggaatgtgatg
acccttaagtcatgctcaccgatagttggggttgatattatgtcctttgacacagaaaaa
gaagtattgcgggcttggagggaccttatccgggaggtggaccctgatataataattgga
tataacatctgcaactttgatttgccatatctcatccggagagctgaagtcttagggatg
gcagaatttcctgtgcttggacgcatcagaaacagcagggttcgtgtaaaggatgcaacc
ttttcttcaagacagcatgggacaagggaaagtaaagaaataacaatagaagggagagtt
caatttgatttatttcaggctgtgcagagggattataagctaagttcttactcactaaat
tctgtctcagcacattttctgaatgagcagaaagaggatgtccatcattcaattatatca
gatcttcaaaatggcaatgcagaaacgaggcgccggcttgctgtatattgtctaaaggat
gcttatctcccacaacggcttttggacaaattaatgttcatttataactatgtggagatg
gctcgagtcactggtgtacctatatcttttcttctctcaagagggcaaagcattaaggtg
ctttctcaacttttaaggaaggcgaagcaaaaggatcttgtcataccaaatgcaaaacag
gttggatctgaacaaggaacatttgagggggctacggttttggaggcacaggctggtttc
tatgagaagccaattgcaacattggattttgcatctctatatccatcaatcatgatggca
tataatttatgttactgcacgctagtaactcctgaagaggttcgcaaactgaaccttcct
ccagagtgtgtcaacaagaccccttctggtgaaacgtttgtcaagtcaaccttacagaag
ggaatacttccggaaattcttgaagaactattgactgctcgtaaaagagcaaaagcagat
ttaaaggaagccacagaccctcgagtcaaagctgtcttagatggccgtcagctagctttg
aagatcagtgcaaattcagtatatgggtttactggagctactgttggtcaattaccatgt
ctagaaatatcttcaagtgttactagctatggtcgacagatgattgagcacacaaaaaag
cttgtggaagacaagtttacagtacttgggggctatgaacacaacgctgaggttatatat
ggagatacagattctgtgatggtgcagtttggtgtgcctacagtggaagaggctatgaaa
ttgggcagagaagctgctgattacattagcgggacatttatcaaaccaataaaactagaa
tttgagaagatttattacccatatttgctgattagcaagaagagatatgctggccttctt
tggacaaatccggacaaacatgacaaaatggatgctaaagggattgaaactgttcgaagg
gataattgtctcttagtcaagaaccttgtaaccgagtgtctttataaaatactagtagac
agagatgttcctggtgctgttcagtacgtcaagaatactatttcagatcttcttctgaac
cgcatggatctgtctcttttagttattactaagggtctgacaaaaactggagatgattat
gaagtaaaggcagcacatgttgaacttgcagagcgaatgcgcaagcgagatgctgctaca
gcacctagcattggtgatagagtaccttatgtaatcattaaagctgcaaaaggggccaag
gcatatgaaaagtcagaagaccctatatacgtgttagagaacaacatacctatagatcct
caatactatcttgaaaatcaaattagtaagccacttctgaggatttttgagccaatactg
aagaatgcaagtaaagagcttcttcacggagatcacacaagatccatctcagttccaacc
ccttcaaacagtggtattatgagatttgccaagaagcaactcacttgcattggatgcaaa
acaccactcagtggctctgatcgaacaatctgcaagcactgcaaaggaagagaggccgaa
ctttattgcagatccgtggctaatgtggctgaactagagaatctatttgggaagctatgg
acacaatgccaagaatgccaaggctctctccatcaggatgtcctatgcactagtcgagac
tgcccaatcttttatcggaggaagaaggctcagaaagacatggctgaagctaaaactcaa
ttagatcggtggaacttttaa
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integrated database retrieval system
