KEGG   Solanum lycopersicum (tomato): 101259186
Entry
101259186         CDS       T02665                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 6B
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03020  RNA polymerase
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101259186
  09124 Replication and repair
   03420 Nucleotide excision repair
    101259186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101259186
   03400 DNA repair and recombination proteins [BR:sly03400]
    101259186
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101259186
  RNA polymerase III system
   RNA polymerase III
     101259186
  RNA polymerase I system
   RNA polymerase I
     101259186
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101259186
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 101259186
NCBI-ProteinID: XP_004246445
UniProt: A0A3Q7ITY2
LinkDB
Position
9:3879909..3882729
AA seq 144 aa
MADDDYDMDGGYVDEPMDPEPDEGAEIEEDNGNNDDIPDPLMGEGEEKTEQQEPVERPRK
TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
GSYEDWGVDELIVEDSWKRQVGGT
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggacgatgattatgatatggacggaggatacgtggacgagccaatggatcctgaa
cctgatgaaggagcagagattgaagaagataatggcaacaatgacgacataccagatccc
ctgatgggtgaaggtgaggaaaaaacagagcagcaagaacctgtggaacgacctcgtaaa
acatcaaagtttatgacaaaatatgaacgtgcgagaatcctgggaactcgtgcactccag
atcagcatgaatgcacctgtgatggttgagctggaaggagaaactgacccacttgagatt
gcaatgaaagagctccgagagaggaagataccattcacaattcgccgttacttgcctgat
ggaagttatgaagattggggagttgatgaattgattgttgaggattcatggaagagacaa
gtcggaggaacttga

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