Solanum lycopersicum (tomato): 101259643
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Entry
101259643 CDS
T02665
Name
(RefSeq) beta-galactosidase 17 isoform X3
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00052
Galactose metabolism
sly00511
Other glycan degradation
sly00531
Glycosaminoglycan degradation
sly00600
Sphingolipid metabolism
sly00604
Glycosphingolipid biosynthesis - ganglio series
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
101259643
09103 Lipid metabolism
00600 Sphingolipid metabolism
101259643
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101259643
00604 Glycosphingolipid biosynthesis - ganglio series
101259643
00511 Other glycan degradation
101259643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101259643
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
101259643
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101259643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
101259643
NCBI-ProteinID:
XP_004241854
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All DBs
Position
6:complement(39654527..39668350)
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AA seq
714 aa
AA seq
DB search
MTTTLKKNGISSFRAVGLRFRAAAMAKKRRVGTTIFMLLLALLVFGAFAPAFAPLPSLSS
FSSRSDIARLNSMGDKNKFEIADDMFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAKAL
GLNTIQTYVPWNLHEPREGQLVFTGIADIFSFLNLCQKLDLLVMLRVGPYICAEWDFGGF
PAWLLTIEPAVRLRSSDPAFINLVERWWGILLPKIVSYAYKNGGPIIMVQIENEFGSYGD
DKDYLHHLVRIARGHLGDDVTLYTTDGGSRENLNKGTIPGDSVFSAVDFSTGDDPWPNFK
LQKEFNAPGKSPPLSTEFYTGWLTHWGEHIANTDATVTASYLERILSKNGSAVLYMAHGG
TNFGFYSGANTGADETDYKPDLTSYDYDAPIKESGDIDNPKYQALRRVIAKYTAVPLPSV
PSNTEKKAYGLIKLQKTKSLFNIVDTTYFDGVTESENPLAMESLDQMFGFMLYVSDYKAK
ANGGLLFIPKVHDRAQVFISCPSDNYDENPEYVGTVARWSNTSIRLPHTQCTSDNRIYIL
VENMGRINYGKYIFDKKGILSPVYLDGKPLQKWKMLPIPFHNLNEDQKNNSVISDAYTDL
RESVQIKLKNKRNYHPVPAFYIGHLTVDEVKDTFLSFRGWSKGVVFINGFNLGRFWPSFG
PQCNLYVPAPILQEGKNLVVILELEAPNAELFVASVDHPDFTCGSSANSRVHQI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacactgaagaaaaacggcatttccagtttccgagcagtgggattgagattc
cgagcagcggcaatggcgaaaaaacgacgcgtcggaacgacgatcttcatgctcctttta
gctctcttagtattcggagctttcgcacctgcctttgctccgcttccttctctatcatct
ttttcttcccgttccgacatcgctagacttaattctatgggtgataagaacaaatttgag
attgcggatgatatgttctggaaagatgggaagccttttcagatcattggcggggacttg
cactattttcgggttcttccagagtactgggaagatcgactcctgagagcaaaggcatta
ggcttgaataccattcaaacatatgtcccatggaatttgcacgaaccaagggaaggtcaa
cttgtttttacaggaatagcagatatcttttcattcctcaatctatgtcagaaattggat
ctcctggtgatgctccgagttgggccttatatttgtgcagagtgggattttgggggtttc
cctgcttggttacttaccattgaacctgctgtaagacttagatcatcagatcctgctttc
attaatttggttgaaagatggtggggaattttgctgccgaagatagtctcttatgcttac
aaaaatggcggccctattataatggttcagatagaaaatgaatttggttcatacggagat
gacaaggactacctgcatcacttagtgaggatagcccgtggacaccttggagatgatgtt
actctatatacgaccgatggaggttcaagagaaaatcttaacaaagggactattcctgga
gattctgtcttttcagctgttgatttttcaacgggagatgatccatggcccaattttaag
ttgcagaaagagttcaatgcaccagggaaatcaccaccgctttcaacggagttctacact
ggttggctcacgcactggggagagcatattgcaaatactgatgcaactgttacagcatct
tacttagaaaggatcttgtcaaaaaatggatcagctgtgctctacatggcacatggtgga
acaaatttcgggttctatagtggtgcaaatactggtgcagatgagactgattacaagcct
gatcttacatcctatgattatgatgcacctatcaaagaatctggagatatagacaatcca
aaatatcaagctcttcgaagggtgattgctaaatatactgcagttcctcttccttcagtt
ccttccaatactgaaaagaaagcatatggacttattaagttgcagaagactaaatcattg
tttaacatagttgataccacatactttgatggtgtcactgaatctgaaaacccacttgca
atggagtctttggaccagatgtttggcttcatgctttatgtttctgattacaaagcaaaa
gctaatggaggtttgttattcataccaaaggtgcatgacagggcgcaagtattcatttca
tgcccttcagacaactatgacgaaaatccagaatatgtaggcactgtagctagatggtca
aatacttccatcaggcttcctcatactcaatgtacttcggataacagaatttatatactg
gtggaaaatatggggcgtataaattatgggaaatacatttttgacaagaagggtatactc
tctcctgtttatttagatggtaaaccgttgcagaagtggaaaatgttgccgattcctttt
cacaacctaaatgaggatcaaaagaataattctgttatttcagatgcatacaccgacctt
agagaatctgtgcagataaaacttaaaaacaaaagaaattatcatccagtgccagctttc
tacattggtcatcttacagttgatgaagtaaaagacacttttttgtcttttcgtggctgg
agtaaaggggttgtatttatcaatggatttaatttaggaaggttttggccgtcctttgga
ccccagtgcaacctttatgttcctgctccaatcctgcaagaaggaaaaaatctcgtggtt
attctcgaattagaggctccgaatgctgagttgtttgtggcctcagttgaccatccagat
ttcacatgtggttcttccgcaaattcacgagtgcatcaaatctga
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