Solanum lycopersicum (tomato): 101263975
Help
Entry
101263975 CDS
T02665
Name
(RefSeq) sphingosine kinase 1-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00600
Sphingolipid metabolism
sly01100
Metabolic pathways
sly04148
Efferocytosis
Module
sly_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
101263975
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101263975
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
101263975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Tim54
Motif
Other DBs
NCBI-GeneID:
101263975
NCBI-ProteinID:
XP_004234133
UniProt:
A0A3Q7FDE0
LinkDB
All DBs
Position
3:complement(1199515..1206209)
Genome browser
AA seq
486 aa
AA seq
DB search
MGNTKPVITAAPILSDRVRVNGVETPVTFTAEEGILRWSENRLSIAKEVLGITVEDSKIK
IRAIKEKDDGGIICCGGNTKGTVRRSYNLEMLTEDSLRIWSQKLQEFIDSLGRPKRLFVL
VNPYGGKRSASKIFIDSVKPLLDDANIDYTVQETKYQLHAKEVAKSLDILRFDGVVCVSG
DGILVEVVNGLLEREDWDSAIKMPLGVVPAGTGNGMAKSLLDAVGLSCTASNATLAIIRG
HKQSLDVATISQGLNRFFSVLMLAWGLIADIDIESEKYRWMGSARIDYYAIQRIFRLRRY
NGCIKFVAAPGYETFGEPADPEGETISEVKSSLVQHKAYCGPALQMKDFNRKIEGPFVSV
WLHNVPWGGEDALAAPDAKFSDGYLDLVVIKDCPKLTLLSLMTELNKGSHVKSPHVLYFK
VKAFVLEPGTQLDDGSKEGIIDVDGEVLARGKGTYKSNYKTLMTYDKLYIKVDQGLATVF
SPSTIS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacgaagcccgttattactgcagctccgattctatcggaccgggttcgggtc
aacggagttgaaactccggtgacgtttacggcggaggaaggtatactccgatggagtgaa
aatcgcttgtcgattgcgaaagaggttctcgggattaccgtcgaagattcgaaaattaaa
attagggctattaaggagaaggacgatggtggaattatttgctgcggcgggaacactaaa
ggtactgtgaggaggagttataatttggaaatgttaactgaggattctcttcgaatttgg
agtcaaaagcttcaagagttcattgattcacttggtcggccaaagagactttttgtgtta
gtgaatccttatggcggaaagagatctgcatcaaagatttttattgatagtgtaaagcca
ctacttgacgatgcaaatatcgactatacagtgcaagaaactaaatatcagctacatgca
aaggaagttgctaaatcattggatattctgagatttgatggagttgtttgtgtcagcggg
gatggaattttggttgaggtagttaatggccttcttgaaagagaggattgggattctgca
ataaaaatgcctcttggagtagtacctgcaggcaccggaaatggcatggcgaagtctctt
ctagatgctgttggtctatcttgtactgcgtccaatgcaacacttgctattattagagga
cacaagcaatcactagatgtagctactatttcacaggggctgaacaggtttttcagtgtg
ctgatgcttgcctggggacttatagctgatattgatatcgagtctgagaagtatagatgg
atgggcagtgctcgaatagattattatgcaatacaacgaatattccgcctcaggaggtac
aatggttgtataaaatttgtggctgcaccaggctatgaaacttttggagaaccagctgac
ccggaaggtgaaactattagtgaagtcaaatcgagtctagttcagcacaaggcatattgt
ggtcctgctttgcagatgaaggatttcaaccgtaagattgaggggccttttgtatcagtt
tggcttcataatgtaccttggggaggtgaagatgctctcgcggcacctgatgcgaagttt
tcagatggttacttggacttagtcgtgataaaggactgtccaaagttaacgttgctatca
ttgatgaccgagttgaacaaaggcagccatgtaaaatcaccacatgtcttgtacttcaag
gttaaagcgtttgttctggagcctggcacacagttagatgatggatctaaagaagggatt
atagatgtagatggtgaggttcttgcaagaggtaaaggaacttacaagtcaaattacaag
acattgatgacatatgacaaactctatataaaagtagatcaagggttggctactgttttt
tctcctagtaccatttcttaa
DBGET
integrated database retrieval system
