Solanum lycopersicum (tomato): 544104
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Entry
544104 CDS
T02665
Symbol
LCY1
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00906
Carotenoid biosynthesis
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
Module
sly_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
544104 (LCY1)
Enzymes [BR:
sly01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
544104 (LCY1)
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
HI0933_like
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_binding_3
Pyr_redox
GIDA
Trp_halogenase
Motif
Other DBs
NCBI-GeneID:
544104
NCBI-ProteinID:
NP_001234226
UniProt:
Q43503
A6YS01
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Position
4:11950236..11952073
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AA seq
500 aa
AA seq
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MDTLLKTPNNLEFLNPHHGFAVKASTFRSEKHHNFGSRKFCETLGRSVCVKGSSSALLEL
VPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIW
PNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCI
MNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVA
YGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETS
LVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIGGTAGM
VHPSTGYMVARTLAAAPVVANAIIQYLGSERSHSGNELSTAVWKDLWPIERRRQREFFCF
GMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRFEI
MTKGTVPLVNMINNLLQDKE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgttgaaaaccccaaataaccttgaatttctgaacccacatcatggtttt
gctgttaaagctagtacctttagatctgagaagcatcataattttggttctaggaagttt
tgtgaaactttgggtagaagtgtttgtgttaagggtagtagtagtgctcttttagagctt
gtacctgagaccaaaaaggagaatcttgattttgagcttcctatgtatgacccttcaaaa
ggggttgttgtggatcttgctgtggttggtggtggccctgcaggacttgctgttgcacag
caagtttctgaagcaggactctctgtttgttcaattgatccgaatcctaaattgatatgg
cctaataactatggtgtttgggtggatgaatttgaggctatggacttgttagattgtcta
gatgctacctggtctggtgcagcagtgtacattgatgataatacggctaaagatcttcat
agaccttatggaagggttaaccggaaacagctgaaatcgaaaatgatgcagaaatgtata
atgaatggtgttaaattccaccaagccaaagttataaaggtgattcatgaggaatcgaaa
tccatgttgatatgcaatgatggtattactattcaggcaacggtggtgctcgatgcaact
ggcttctctagatctcttgttcagtatgataagccttataaccccgggtatcaagttgct
tatggcattttggctgaagtggaagagcacccctttgatgtaaacaagatggttttcatg
gattggcgagattctcatttgaagaacaatactgatctcaaggagagaaatagtagaata
ccaacttttctttatgcaatgccattttcatccaacaggatatttcttgaagaaacatca
ctcgtagctcgtcctggcttgcgtatagatgatattcaagaacgaatggtggctcgttta
aaccatttggggataaaagtgaagagcattgaagaagatgaacattgtctaataccaatg
ggtggtccacttccagtattacctcagagagtcgttggaatcggtggtacagctggcatg
gttcatccatccaccggttatatggtggcaaggacactagctgcggctcctgttgttgcc
aatgccataattcaatacctcggttctgaaagaagtcattcgggtaatgaattatccaca
gctgtttggaaagatttgtggcctatagagaggagacgtcaaagagagttcttctgcttc
ggtatggatattcttctgaagcttgatttacctgctacaagaaggttctttgatgcattc
tttgacttagaacctcgttattggcatggcttcttatcgtctcgattgtttctacctgaa
ctcatagtttttgggctgtctctattctctcatgcttcaaatacttctagatttgagata
atgacaaagggaactgttccattagtaaatatgatcaacaatttgttacaggataaagaa
tga
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