KEGG   Serratia marcescens subsp. marcescens Db11: SMDB11_0319
Entry
SMDB11_0319       CDS       T03985                                 
Symbol
ribD
Name
(GenBank) fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracilreductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smac  Serratia marcescens subsp. marcescens Db11
Pathway
smac00740  Riboflavin metabolism
smac01100  Metabolic pathways
smac01110  Biosynthesis of secondary metabolites
smac01240  Biosynthesis of cofactors
smac02024  Quorum sensing
Module
smac_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:smac00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SMDB11_0319 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMDB11_0319 (ribD)
Enzymes [BR:smac01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SMDB11_0319 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SMDB11_0319 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CDG10910
LinkDB
Position
344014..345123
AA seq 369 aa
MHHDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMA
GDKARGATAYVTLEPCSHHGRTPPCADALVAAGVTRVVAAMQDPNPQVAGRGLYKLQQAG
VEVRHGLMLAEAEAVNLGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPEARQD
VQRLRAQSAAILSTSATVLADDPSLTVRWDELDAETQRLYPRENLRQPLRILLDSQNRIT
PQHRVVQQPGATWLARLQADEQAWPQEVEQFICPAHGGGIDLVVMMMLLAKRQVNSIWVE
AGATLAGALLQAGLVDELILYIAPKLLGDNGRGLCHLPGLERLADAPEFVFSDVRQVGPD
LRLRLRAKH
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcatcacgacgaattttacatggcgcgcgccttcgaactggcgcggctggggcgtttc
accaccgcgcccaatccgaacgtcggctgcgttatcgtgcgcgacggcgaaattgtcggt
gaaggctatcatctgcgcgccggcgagccgcatgcggaagtgcacgcgctgcgcatggcg
ggcgacaaggcgcgcggtgccactgcctatgtcacgctcgaaccgtgcagccaccacggc
cgcacgccaccctgcgccgatgcgctggtggccgccggcgtgacgcgggtggtcgcggcg
atgcaagatcccaatcctcaggtggcggggcgcggcttgtacaagctgcagcaagccggc
gtcgaagtccgtcatggcctgatgctggccgaggccgaagcggtcaacctgggcttcctc
aaacgcatgcgcaccggtttcccctatgtgcagctgaagctgggcgcgtcgctggacggc
cgcacggcgatggcctccggcgaaagccagtggatcacctcacccgaagcgcgtcaggac
gtgcagcgcctgcgcgcgcagagcgccgccattctcagcaccagcgccaccgtgctggcg
gacgatccgtcgctgacggtgcgttgggatgagctggacgccgagacgcagcgcctctat
ccgcgcgaaaatctgcgccagccgctgcgcatcctgctcgacagccaaaatcgcattacc
ccgcagcaccgcgtggtgcagcagccgggcgctacctggctggcgcgcctgcaggcggat
gaacaggcctggccgcaagaggtcgaacagtttatctgcccggcgcacggcggcggcatc
gatctggtggtgatgatgatgctgttggccaagcgccaggtgaattcaatctgggtagag
gcgggcgcaacgctggccggcgcgctgctgcaggctggcctggtggatgagctcattttg
tacatcgcgccgaaactgttgggcgataatggccgtggcctgtgtcatctgccgggcctg
gaacggctggccgacgcgccggaattcgtctttagtgacgtgcgtcaggttggccccgat
ctgcgtttgcgcctgcgggcgaaacactga

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