Serratia marcescens subsp. marcescens Db11: SMDB11_3451
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Entry
SMDB11_3451 CDS
T03985
Symbol
speF
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00330
Arginine and proline metabolism
smac00480
Glutathione metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SMDB11_3451 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SMDB11_3451 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SMDB11_3451 (speF)
Enzymes [BR:
smac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SMDB11_3451 (speF)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CDG14016
LinkDB
All DBs
Position
complement(3664267..3666432)
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AA seq
721 aa
AA seq
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MKELKIATSASLVATIETLRQIVRVEQTDYTDVAAVVVSVADVDAGILARLQATGFDIPT
FVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTYV
EMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKDA
QKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDAHCFDERYLREQIREVAPEKAAAARPFRLAIIQLGTYDGTIYN
ARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAG
FSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGAAGRR
MWMDCVKLGIETRKQLLTRCSQLKPFIPLQVAGKDWQDYDTDLIANDARFFTFVPGETWH
GFEGYAQDQYLMDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSI
LFLLTPAENPAKMEQLVEMLAQFERYVAEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQEM
HDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALP
YPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIK
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatcgcgaccagcgccagcctggtcgccaccattgagacgctgcgc
cagatcgtgcgcgtagagcagacggactacactgacgtggcggcggtggtggtgtcggtc
gccgacgtggacgccggcattctggcgcgcttgcaggcgacggggttcgatattccgacc
ttcgtggcggtggaaggggacgagcatctttccccggattatctgccgtttgtcagcggg
gtcttcgcgctgctggccggcgccagcaagccattctacatggcgcagctggaggccgcc
gccgacgcctacgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctacgtc
gagatggaaaactcgacctttgcgtgcccggggcatcagggcggagagttcttccgcaaa
cacccggccggtcggcagttcttcgatttctacggtgaaaccctgttccgttccgatatg
tgcaacgccgacgtcaagctgggcgatctgctgatccacgaaggatcggccaaggatgcg
caaaagcacgcggcgcgggtgttcaacgccgataaaacctacttcgtgctcaacggcacc
tcggcggccaacaaggtggtgaccaacgcgctgctgacccgtggcgatctggtgctgttc
gatcgcaacaaccacaaatccaaccaccacggggcgctgatccaggctggggccacgccg
gtctatctggaaaccgcccgcaacccgttcggctttatcggcggtatcgatgcgcactgc
ttcgatgaacgctacctgcgcgagcagatccgcgaagtggcgccggagaaagccgcagcg
gcacggccgttccggctggcgatcattcagctcggtacctacgacggcacgatttacaac
gctcgccaggtgatcgacaccatcggccacctgtgcgattacatcctgttcgactccgcc
tgggtgggctacgaaggctttattccgatgctgaaagagtgctcgccgctgctgctggag
ctggacgagcacgatccgggcatttttgtcacccagtcggtgcataaacagcaggcgggg
ttctcgcagacctcgcagatccacaagaaagacgaccatatcaaagggcagaagcgccac
tgcaaccataagcatctgaacaatgcgttcatgctgcatgcgtcgaccagcccgttctat
ccgctgttcgccgcgctggacgtcaacgccaagatgcatgccggcgccgccggacgtcgc
atgtggatggactgcgtcaagctgggcatcgagacgcgtaaacagctgctcacgcgctgc
tcgcagctgaagccgtttattccgctgcaggtggcgggcaaggactggcaggattacgat
accgatctgattgccaacgacgcgcgtttcttcaccttcgtaccgggggaaacgtggcac
ggcttcgaaggctatgcccaggatcagtatctgatggatccgtgcaagttgctgctgacc
acgccggggattgacgccgcgactggccaatacaccgagttcggcgtgccggccaccatt
ctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcgatc
ctgttcctgctgactccggcggaaaacccggccaagatggaacagctggtggagatgctg
gcgcagttcgagcgctatgttgcagaagacgcgccgctgagcgtggtgctgccaacggtg
taccgcaagaacgagcagcgctatcgtggctacagcattcgccggctgtgccaggagatg
cacgatctgtacgtcagcttcgacgtcaagcagctgcaaaaagagatgttccgccaggat
catttcccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgacaac
gtcgagctggtgccgatcggccaggcggaagggcgcatcgcggcggagggggccttgccg
tacccgccgggcgtgctgtgcgtggtgccgggcgaagtgtggggcggcgcggtgcagcgc
tatttcctggcgttggaagagggcatcaaccgcctgccgggcttctcgccggagctgcag
ggagtctacatcgagaaaaaagatcacggctggaagcgcatcttcggctatatgatcaag
ccatag
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