Serratia marcescens subsp. marcescens Db11: SMDB11_4049
Help
Entry
SMDB11_4049 CDS
T03985
Symbol
gmhD
Name
(GenBank) ADP-L-Glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00540
Lipopolysaccharide biosynthesis
smac01100
Metabolic pathways
smac01250
Biosynthesis of nucleotide sugars
Module
smac_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SMDB11_4049 (gmhD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
SMDB11_4049 (gmhD)
Enzymes [BR:
smac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SMDB11_4049 (gmhD)
Lipopolysaccharide biosynthesis proteins [BR:
smac01005
]
Core region
SMDB11_4049 (gmhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
ThiF
Shikimate_DH
adh_short
Motif
Other DBs
NCBI-ProteinID:
CDG14607
LinkDB
All DBs
Position
4322560..4323522
Genome browser
AA seq
320 aa
AA seq
DB search
MPRQQLSRGNPMIIVTGGAGMIGSNIIKALNDKGYRDILVVDNLKDGTKFVNLVDLDIAD
YIDKEDFIASIVAGDDLGEIEAVFHEGACSATTEWDGKYMMDNNYQYSKDLLHYCLDREI
PFLYASSAATYGGREEFIEERQYEAPLNVYGYSKFLFDQYVREILPEADSQICGFRYFNV
YGPREGHKGSMASVAFHLNTQINRGENPKLFAGSENFKRDFIYVGDVAAVNLWFWETGKS
GIFNCGTGRAETFQAVADAVVDFHQKGAVEYIEFPEKLKGRYQAYTQADLTKLRAAGYDA
PFKTVAEGVKEYMAWLNRTA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgccagcagcttagcaggggtaacccaatgattatcgtcacaggcggcgccggc
atgatcggcagcaacatcattaaggcactgaacgacaagggatatcgcgatatcctggtg
gtggataacctgaaagacggcaccaaattcgtcaacctggtcgatctggacatcgccgac
tatatcgataaagaagactttatcgccagcatcgtggccggcgacgatctgggcgaaatc
gaagcggtgttccacgaaggcgcctgctccgcgaccaccgagtgggacggcaagtacatg
atggacaacaactatcagtactccaaagatctgctgcactactgcctggatcgcgaaatc
ccgttcctctacgcctcctccgccgccacttacggcggccgcgaagagtttatcgaagag
cgtcagtatgaagcgccgctcaacgtgtacggctactccaaattcctgttcgatcagtac
gtgcgtgagatcctgccggaagcggactcgcagatctgcggcttccgctacttcaacgtt
tacggcccgcgcgaaggccacaaaggcagtatggccagcgtcgccttccacctgaacacc
cagatcaaccgcggcgaaaacccgaaactgttcgccggcagcgaaaacttcaagcgtgac
ttcatctacgtcggcgacgtggcggcggttaacctgtggttctgggaaaccggcaaatcc
ggcatcttcaactgcggcaccggccgggcggaaaccttccaggcggtggccgacgcggtg
gtggacttccatcagaaaggcgcggtggaatacatcgagttcccggaaaagctgaagggc
cgctatcaggcgtacacccaggccgatctgaccaagctgcgcgccgccggctacgacgca
ccgttcaaaacggtcgccgaaggcgtgaaagagtatatggcctggttgaaccgcaccgca
taa
DBGET
integrated database retrieval system
