Scophthalmus maximus (turbot): 118288230
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Entry
118288230 CDS
T09850
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118288230
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118288230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118288230
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118288230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
118288230
NCBI-ProteinID:
XP_035469979
EnsemblRapid:
ENSSMAG00025003685
LinkDB
All DBs
Position
17:complement(6061552..6169776)
Genome browser
AA seq
1712 aa
AA seq
DB search
MSLWLAKHKVLLSEFSTMPVCDCRCSSPPHGHAGASAPSVAQEQEMPSRPLDPPLPSLHR
RTSASLCLSLLLLLLCLLHLPPACHSRREKGGGAGGGHYIPIPQPPPHHMALPNILRGLS
IAVVLVGNSSEMVLAGAREKEDFLHMAPNVEVLTMNETDPKSIIKSICDLMTEHWLQGVV
FGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFGPSIEQQASVML
NIMEEYDWYIFSIVTTYYPGYQDFVTKIRGTIENSFVGWEMEEVLLLDMSVDDGDSKIQN
QMKKLQSPVILLYCTKEEANTIFEVAHSVGITGYGYTWIVPSLIAGDTDVVPAEFPTGLL
SVSYDEWDYGLDARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPEKKTPISGNPNEV
LRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSLSMKYHVWPRFE
LYGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKTLNQTKDSGIYIK
RCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLT
INEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAMAV
FIFEYLSPVGYNRCLADGREPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSV
WAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPFRFGTVPNGSTERN
IRNNYPEMHGYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSG
YIFATTGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSSQLD
IDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVFSISRGIYSCIHG
VQIEEKSSSALDSPSGTMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYD
ISEHRRSLAGHSDCKPPYIPEDNMFSDYISEVERTFGNLHLKDSNLYQDHYLHHHGSTLG
LNGPPPNRPGSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRNMSKFDLLAGQTP
PSGQGFKGGLPDLYGKFSFKGGASSSTYIPGHSYCPGRGEEDGNIRSDVSDISTHTVTYG
NLEGNAKKRKKYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHGHRSSPPLLPT
ERKRGGSGNNDGNSYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPGNRDGVVGACT
SLVPVDDFLKSKPKKSDSKSGGGSGLAGGEWECRNCRASGGGGGKQMSMHGGVGGGGYGG
GMSCGSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQMGGGNGGGGGMVAGP
QSQPQAQQRRKSGGFGKPLRRQHSYDAFVDLQKEESGGMGSQMGGVGGGGGMSGAGMGGM
LPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLFYGGEGRKGPGSPFGLF
RGGDGLHRRSVGERDMRDRDRSLMEGGGGAAFSLSKSLYPDRVNQNPFIPTFGDDQCLMH
GAKQYYIKKQQQQQQVAKNSRSEFRAQMSTTSYLPASATAGVVSNVSPRFPKELSLGGMN
HHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttggctggcaaaacacaaggtattactctccgagttctccaccatgcctgtc
tgcgactgccgctgctcctccccacctcatggccatgccggggcctccgccccctcggtc
gcccaggagcaagagatgccatcgcggcccctagatcctcccctaccttcgcttcaccgt
cgcaccagcgcttctctctgcctctccctccttctcctgctgctctgccttcttcacctt
cccccggcctgccactcacggagagagaaaggtggaggagccggtggtggccactacata
cccattccccagcccccgccgcaccacatggcactacccaacatcctgcgaggcctcagc
atcgccgttgtcctggtgggcaactccagtgagatggtgctggccggggcccgggagaag
gaggactttctccacatggctcccaacgtggaggtgctgaccatgaacgagacggaccct
aaaagcatcatcaagagcatctgtgacctaatgactgagcactggctgcagggtgtggtg
tttggggatgacacggaccaggaggccatcgcccagatcctggacttcatttcggcccag
acccatatccccatcctcggagtccgtgggggctcttccatgatcatggctgccaaggac
gacaactccatgttctttcagtttggcccctccatcgagcagcaggcttcggtcatgctg
aacatcatggaggaatatgactggtacatcttctccatcgtcaccacgtactacccgggt
taccaggactttgtcaccaagatccgtggcaccatcgagaacagctttgtgggctgggaa
atggaagaggttttattactcgacatgtccgtagacgacggagattcaaagatccagaac
cagatgaagaagctccagagccccgtcattcttctctactgcacaaaagaagaggccaac
accatcttcgaggtggcccactctgtcgggatcaccggctacggctacacatggatagtc
ccctcgctgatcgcgggagacactgacgtcgtgcctgcagagttccccacaggtctgctc
tccgtgtcttacgacgagtgggactatggcctagatgcccgtgttcgcgacggcgtggcg
atcatcaccatggcgacttccaccatgatgatggaccgcggaccacacaccctactgaag
tccgagtgccacggagctcctgaaaagaagacccccatctcaggcaaccccaacgaagtg
ctcaggtacctgatgaatgtgacgttcgagggacgtaatctgtcgttcagtgaggacgga
taccagatgcaccccaagctggtcatcattctgctcaacaaggagaggcagtgggacagg
gtgggcaaatgggagaatggttccctgtccatgaagtaccatgtgtggccgcgctttgaa
ctgtatggggcagcaaccagggaggatgaccacctgtccatcgtgacattggaggaggct
ccgtttgtcattgtggaagacgtggatccgcttagcgggacctgcatgaggaacactgtg
ccctgccggaaacagatcaagacactgaatcagacgaaggattctgggatctacatcaag
cgttgctgtaagggtttctgcattgacatcttgaagaagattgcaaagactgtcaagttc
acctacgacctttacctggtcaccaatggcaaacatggcaagaaaatcaacgggacctgg
aatggcatggtgggggaggtggtgttgaaaaacgcccacatggccgtcggctccttgacc
atcaacgaggagaggtcggaggtcatcgacttctccgtccccttcatcgagacgggcatc
agcgtcatggtctcccgtagcaacggcactgtttcaccctcggccttcttagagcccttc
agtgcggatgtgtgggtgatgatgtttgtgatgctgttgctggtgtcagcaatggctgtg
tttatattcgagtacctcagccctgtgggctacaaccggtgtctggctgacggcagagag
cctcacggtccatccttcaccatcggtaaggccatctggctgctgtggggtctggtcttc
aacaactccgtgccggtgcagaaccccaaaggcaccacgagtaagatcatggtgtcagtg
tgggccttcttcgctgtcatcttcctggcctcttacactgccaacctggctgccttcatg
atccaggaggaatacgtggaccaagtaactggtctctcagacaaaaagttccagagtccc
aatgacttctcgcctccgttccggtttggcactgtcccgaacgggagcacggagaggaac
atcaggaacaactatccagagatgcacggctacatgacaaagttccatcagagaaacgtc
aacgaggcattgcagagtctcaaggctggcaaactagacgctttcatttatgacgcagcc
gtactgaactacatggccggcagggatgagggctgcaagctggtgaccattggtagcggc
tacatctttgccaccacgggatacggcatcgccatccagaaggagtcgctctggaagaga
cacgtggacctggccatcctgcagctcttcggagacggtgagatggaggagctggagtcc
ctgtggcttaccgggatctgccaccacgagaagaacgaggtgatgtccagccagctggac
attgacaacatggccggcgtcttctacatgctcggtgccgccatggctctgtcgctcatc
accttcatctgtgagcactggttctactggcagcttcgcttctgcttcatgggtgtctgc
tccggccagcccggcttcgtcttctccattagcaggggcatatacagctgtatccacggg
gtgcagatcgaggagaaaagcagctcggcgctggactccccatcaggcaccatgaacaac
acccattccaacattatgcgcctcttacgcaccgccaagaacatggcctccctgtcgggg
gtgaacggctcgccacacagcgctctggacttcatccgccgtgaatcctctgtgtatgac
atctctgagcaccgccgcagcttggccggccactccgactgcaagcccccttacatacca
gaggacaacatgttcagcgactacatcagtgaagtggagaggacgtttggcaacctccac
ctgaaggacagcaatctgtaccaggaccactacctgcatcaccatggctcaacgctaggg
ctcaatggacctcctcccaacagacccgggagcttgggaagtgctagttcactggagggt
ggcatgtttgactgtgacagcctgggtggtggcgtggctcctattttcaccacccagccc
tgttctgcactgacccacaggaacatgagcaagtttgacctgctggctggacagactccc
ccctcaggccagggatttaagggaggcctgccagacctgtacgggaagttctcctttaaa
ggaggtgcctcaagctccacgtacatccctgggcacagctattgtccagggaggggagag
gaggatgggaatatacgctcagatgtctcagatatttccacgcacactgtaacctacggg
aacctggagggcaatgccaagaagcgcaaaaagtaccgtgatagcctgaaaaagaggccg
gcctctgccaagtccagacgggagctggacgagattgagctgggctacaggaggaaacct
taccacatcagccaccaccactaccacggccaccgctcttccccgccacttttgcccact
gaacgcaagagaggaggaagtggaaacaatgatgggaactcctatctcttcagagaaaag
gagagcgttagggatttttatttggaccagtttcggcccaaggaaggcgtcccacagtgg
gagcatgtggacctgacagagggccctgggaatagagacggggttgtgggggcctgcacc
tctctggttccagtagatgactttcttaagagcaaacccaaaaagtctgattccaagagt
gggggaggatctgggttggcagggggagagtgggagtgcaggaactgtcgggctagcggg
ggaggagggggcaagcagatgtccatgcacggaggagtgggtggtggcgggtatggtggt
ggtatgagctgcgggtcctcgggaggaggaggaaacagccgccccagctctgcaacctgc
atgcgctgcgagggctgtaaaaagacaggaaatctctacgatatcagcgaggacaacaac
cacctcttggaacagatggggggaggcaacggtgggggaggaggtatggttgctggtcct
cagtctcaacctcaggcccagcagaggaggaagagtggaggattcggcaagccactgagg
cggcagcactcgtacgacgcatttgtcgaccttcagaaggaggagtcaggtgggatggga
agtcagatggggggtgtaggaggaggtggagggatgagtggtgcgggtatgggaggcatg
ttgcccccacccaggagtgttagcttgaaggagaaagaacgctacatggagggcaccagc
cccttcgcacacatattcgagcgtcacggaggctcggagagagaaagggagagagacagg
gacccgctgttttatggcggtgagggccggaaaggacccggctcaccgtttggcctattt
agaggcggtgatggcctccaccgccgctccgttggagagagagacatgagagacagggat
aggtcgttgatggaaggaggaggtggggcagcgttctctttatccaaatcgctttaccct
gaccgggtgaaccaaaacccctttatacccacctttggggatgaccagtgtctgatgcac
ggagccaaacaatattacataaaaaagcaacagcagcagcaacaagttgccaaaaatagc
agaagtgaattcagggcccagatgagcacgacgtcatatctgccagcatctgccacggcc
ggggtggtgtccaatgtatccccccggttcccaaaagagctcagcctcggtgggatgaac
caccacgggtccatgctgggggtcggccccccacgtcccttcaatggaagcaatggccat
gtgtacgagaaactctccagcattgagtctgatgtgtga
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integrated database retrieval system
