Scophthalmus maximus (turbot): 118313069
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Entry
118313069 CDS
T09850
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118313069 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118313069 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118313069 (grin2bb)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118313069 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118313069
NCBI-ProteinID:
XP_047190035
LinkDB
All DBs
Position
8:complement(12774932..12861534)
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AA seq
1763 aa
AA seq
DB search
MFKGRHLHSFTMLVSLHSSPSRLQDKRFVSPPSSPLHPPPPPQDISLDPPYPQPRLTLPF
LSLSISLLLLSVLLLPVCESRRGGGPGTGPGGAPGGQGGQRGGGTQRGVVIPPQYSPGSP
ALPPINPKLINSLSIAVILVGNSSEVAMGAGLEKEDFLHIPYPPKVEVVTMNETDPKSII
NRICGQMTRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDHSM
FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEV
LLLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEAATIFEVAHSVGLTGYGYTWIVPSLV
AGDADHVPDVFPTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLIKSSCL
GTPDKKSSSTGHSKEILKYLMNVTFEGRNLSFSEEGHQMFPKLVIILLDKDRQWDRVGKW
ERGSLTMRFHVWPRFELYSAAEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRK
QLKLSNQTGDSGIYIKRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKINGTWNGLV
GEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADV
WVMMFVMLLMVSAVSVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSV
PVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFS
PPFRFGTVPNGSTERNIRNNYRDMHTYMTSFHQKNVDEALYSLKSGKLDAFIYDAAVLNY
MAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGDMEEFEALWLT
GICHNEKNEVMSSQLDVDNMAGVFYMLGAAMILSLITFISEHLFYWQLRFCFMGVCSGKP
GVTFSISRGIYSCIHGVQIEENKSTIDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGI
NGSPHAALEYSHSARESTIYDIQEHRRSLVGHPVDCKSAPAYLPEDNLFSDYISEVERTF
GNLPLKDSNLYQDHYLHHHPASALGMSGPPPNRPRSLGSASSLEGGMFDCDSLGGGVAPI
FTTQPRPSMTHRNTNKFDLIAGHTPADSNQGGFKGSNVYGRFSFKGGASSTGLIGGHDRY
CGGGGGGSGGDDGNIRSDVSDISTHTVTYGNLEGNTKRRKQYRDSLKKRPASAKCRREQD
EIELSGFRRRPHHHTVHHHFPHGPLAHRTVSPPLERKRGGGGGNSSPYFFRKDKENLRDF
YADQFRSKEGKANWEQEGGSGGSGVGGGSGGGICKSLVPVEDFLKGKVKKPECKGGLGSV
SAGQPGHTCWEKGVSGLGGGGIAGGDWECRNCHSVCHHGDGGGGGTCQAGGVGGSSSRPS
SATCKRSDSCKMQPGNLYNISEDNNMMFPGGKSSVGTSQAQTQAQRRKLGPGGRVLRRQH
SYDTFVDLQREGAGRMGGVGGGMGGQFPQPRSVSLKDKDRFMEGPSPYAHMFERYAGERE
SPVFGGIGGDRAKGGSSFSLFRGGEGGLHRRSVGERDLRERDRAMMGGGGGGGGGSRGAG
TYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKPYYIKKPQTQQQQQQLLNNSRGGGDFH
GSMGVTSYLPASATAGVMSNVVPRFPKELCLGGVGGPMGNHHGANKLLPAGRDTLGLGQG
HRPFNGASNGHVYEKLSSIESDV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacactccttcacaatgcttgtcagcctccactcttctccc
tcccgtcttcaggacaagcgctttgtctcccctccctcctccccccttcatcctcctcct
ccccctcaggacatctctctggatcctccttaccctcagcctcggctaacccttcccttc
ctctccctgtccatctcgctcctcctcctctccgtgctcctcctgcctgtctgcgagtct
cgcagaggtggaggtccaggcacagggcccggaggtgccccagggggacaaggtggacag
aggggaggcggcacccaaaggggtgttgtcatccccccgcagtactcccccggctcacca
gctctccccccaatcaatcccaaactgatcaattcactcagcattgctgtcatcctggtg
ggcaactctagtgaagtagccatgggggctggacttgagaaagaggacttcctccacatc
ccttaccctcccaaggtcgaggtggtcaccatgaacgagaccgaccccaagagcatcatc
aaccggatctgcggacaaatgacaaggaactcgctgcaaggcgtagtgtttggtgatgac
acggaccaggaagctattgctcagatcctggacttcatctcagcccagacacacatcccc
atcctgggcatcaggggagggtcctccatggtcatggcagccaaggacgaccactccatg
tttttccagtttggaccgtccatcgagcagcaggcctctgtcatgttgaacatcatggag
gagtatgattggtacatattctccatcgtcaccacctactaccctggataccaggacttt
gtcaacaaggttcgcagcaccatcgacaacagcttcgtgggctgggagcttgaagaggtc
ctcctgctggacatgtccgtggacgacggagactccaagatccagaaccagctgaagaaa
ctgcagagtcccgtcattctgctgtactgcacaaaggaggaggcggccactatcttcgaa
gtggcccattctgtcggcctcactggttacggctacacctggatcgtgccctcgctggtg
gccggagatgcagaccatgttcccgatgtcttccctacagggctcatctcagtgtcatat
gacgaatgggactacaacatcgaggccagggtacgcgatgcagtggctgttattgccacg
gcgacctctaccatgatgctggaccgggggccacacaccttgataaagtcaagctgcctt
gggacacctgacaagaagagctccagcaccggccactccaaggaaatactgaagtacctc
atgaatgtcacatttgaaggccggaacctgtcattcagcgaagagggtcaccagatgttc
cctaaactggtcatcattcttctcgacaaggacagacaatgggacagggtcggcaagtgg
gagagaggctctttgacgatgaggtttcacgtgtggcctcgctttgagctgtactctgcg
gcggaggagcgggaggaccacctgtccatcgtgactctagaggaggcgccgtttgtcatt
gttgaggacgtcgacccgctcagtgggacctgcatgaggaacactgtgccgtgccgcaaa
cagctcaaactcagcaaccagacaggtgattcagggatttatatcaagcgctgctgcaaa
ggcttctgcattgacatcctgaagaagatcgccaaggcggtgaagttcacatacgacctc
tacctggtcaccaacggcaaacacggcaagaagatcaatgggacatggaatggcttggtg
ggggaggtggtgttgaagaatgcccacatggcagtgggttcactcaccatcaacgaggag
aggtcggaggtcatcgacttctccgtgccgttcattgagacggggatcagtgtcatggtc
tcccgtagcaacggcaccgtctctccctccgcctttcttgagcccttcagtgctgatgtc
tgggtgatgatgtttgtgatgttgctgatggtgtcagctgtgtctgtgtttgtgtttgag
tacttcagcccggtgggttacaatcgctgtctggcagatggacgagagcctggaggtccc
tccttcaccattggcaaggccgtttggctgctttggggtctggttttcaacaactccgtc
cccgtgcagaatcctaaaggcaccaccagtaagatcatggtgtcagtgtgggccttcttc
gctgtcattttcctggcctcctacactgccaacctggccgccttcatgatccaggaggag
tatgtcgaccaggtgtcgggcctgtcagacaaaaagttccagaagccgaatgaattctcg
ccgccattccggttcggcacggtgcccaatgggagtacagagcgcaacatccgcaacaac
taccgagacatgcatacctacatgacgagtttccaccagaagaacgtagacgaggcactg
tacagtctgaagagcggcaaactggatgccttcatctacgacgccgcagtgctgaactac
atggcgggcagagacgagggctgtaagctggtcaccattgggagcggcaaggtgttcgcc
tccactggctacggcatcgccatccagaaggattcaggctggaagcgagctgtggatctt
gccattctcatgctgtttggagatggtgatatggaggagtttgaggctctatggctgacg
ggcatctgccacaatgaaaagaacgaggtgatgagcagccagctggacgtggacaacatg
gcaggggtcttctacatgctcggggccgccatgatcctgtcgctcatcaccttcatcagt
gaacatttgttctactggcagctgcgcttctgcttcatgggcgtgtgctccgggaagccc
ggggtcaccttctccattagcagaggtatctacagctgcatccatggggtacaaatcgag
gaaaacaagtcgaccatcgactcaccttcggccaccatgaagaagaacatgaacaacacc
cattccaacatcctgcggttgctccgcaccgctaaggacatgaccgctgtcccaggcatt
aacggctctccacacgctgccctggagtacagccacagtgctcgtgagtcaactatctat
gatatccaggagcaccggcgcagcctggtgggtcaccctgtggactgtaagtcagcaccg
gcttacctgcccgaggacaacttgttcagtgactacatcagcgaggtggagaggactttt
ggcaacttgcccctgaaggacagcaacctgtaccaggaccattacctgcaccaccacccg
gcctcggctctgggtatgtccggccccccgcctaataggccgcgcagtttaggcagtgct
agctcattggaagggggcatgtttgattgcgacagtttagggggtggggtggcacccata
tttaccacccagccccggccctccatgactcacaggaataccaataaatttgacctgatc
gctggccacacccctgcggattccaaccagggtgggttcaagggaagcaatgtgtatggc
aggttttctttcaaaggaggcgcatccagcacggggctcatcgggggtcatgacaggtac
tgtggtgggggtgggggaggctcagggggtgacgatgggaacattcgatctgacgtatcg
gatatctccacccacacagttacctatggcaacctggagggcaacaccaagcggcgtaag
cagtacagggacagcctgaaaaaaaggccagcctcggccaagtgcagacgggagcaggac
gagatagagctgagcggcttcaggaggagaccccaccaccacaccgtccaccaccacttc
ccccacgggcccctggcacaccgcacggtctcacctcccctggagcggaagaggggagga
ggagggggtaattcttcaccctactttttccgcaaagacaaagagaacctgagggatttc
tatgcggaccagtttcgctccaaggagggcaaggccaattgggagcaagagggtggaagt
ggaggaagcggtgtaggcggtggtagtggtggtggtatctgtaaaagcttagtgcctgtg
gaagatttcctaaaaggtaaagtgaagaagccagagtgtaaaggtgggcttggctcagtg
tcggcaggacagccgggccacacctgctgggagaagggggtttctggtctaggagggggt
ggcatagcaggtggtgactgggagtgtcgtaactgccacagtgtgtgtcaccacggtgat
ggtggaggaggtggcacatgtcaagctggtggagttggggggagcagcagtcgccccagc
tccgctacctgcaaacgctctgactcctgtaagatgcagccaggcaacctttacaacatc
agcgaggataacaacatgatgttccctggagggaagagtagtgtaggaaccagccaagca
caaactcaggcacagcgcaggaagctagggccaggtgggagggtgttacggaggcaacac
tcatatgacacatttgtggacctgcagagggagggggcagggcgcatgggaggggttggt
gggggcatggggggacagtttccccagccccgaagtgtgagcttgaaagacaaagatcgc
ttcatggagggccccagcccttacgctcacatgtttgagaggtatgcaggtgaaagggag
tctcccgtgtttggaggcataggtggggatagggcaaaaggaggctcctccttcagtctg
tttcgtggaggcgaaggtgggttgcatcgtcggtcagtgggggagagggacctaagggaa
agagatagagctatgatgggaggagggggcggtggtggtggtggtagcagaggggccggg
acttactccttgtctaaatctctctacccagataaggtgaaccagaaccccttcatccca
accttcggcgacgaccagtgtctattacacggtgccaaaccgtactacatcaaaaagcca
cagacacagcagcagcagcaacaacttctcaacaacagccgaggaggaggggacttccac
ggctccatgggagtgacttcctatttgcccgcatcagccacagctggggtgatgtccaat
gtggtccccaggttccccaaagagctttgtctgggcggggtgggagggcccatggggaac
catcatggggccaacaagcttctgcctgcgggcagggacacattaggtttggggcaggga
catagacccttcaacggtgccagcaatggacatgtttatgaaaagctctccagcattgag
tcagatgtctga
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integrated database retrieval system
