Scophthalmus maximus (turbot): 118314446
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Entry
118314446 CDS
T09850
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118314446 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118314446 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118314446 (grin1b)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118314446 (grin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Ion_trans_2
SIP
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
118314446
NCBI-ProteinID:
XP_047185161
EnsemblRapid:
ENSSMAG00025021548
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All DBs
Position
19:1031060..1067199
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AA seq
915 aa
AA seq
DB search
MELRGVLLLAVLQCCSVARGGCEPRLVNIGAVLSQKRYEQVFKEAVSQANALYGRDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVGACLHLPHLPHRHHHLMKTQTNVSYREGHRINV
LSLTDRSSLYTVSDRLGRGPQSIHLSFLRTVPPYSHQASVWFDLMREFRWNHIILIVSDD
HEGRAAQKRLETLLEERETKNKNRNYENIDQQHFDFRRTPKAEKVLLFSQDTNLTALLLE
AKDLEARVIILSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQ
LINGKNESAHIADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKY
PDGLTGRIEFNDDGDRRFATYSILNYQQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETE
KPVGYQMSTKLKIVTIHQEPFVYVKPTKTDGTCKEEYTLNGVLIKKVICTGPNGTIPGQP
TVPQCCYGFCVDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGL
ADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLS
VHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSA
RILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSV
DIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTT
GELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLT
FENMAGVFMLVGGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDI
TGQLNLSDPSVSTVV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtggcgtgctgctcctcgccgtgctgcagtgctgctccgtggcccgtggc
ggctgcgagccccggctggtgaacatcggtgccgtcctgagtcagaagcgttacgagcag
gtgttcaaggaggcggtgagtcaggccaacgccctgtacgggagagacaagttcaagatg
aacgccatctccgtcacgcacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccaaccaggtgggggcgtgtcttcatcttcctcatcttcctcatcgtcat
catcatctcatgaaaactcaaacaaacgtctcatacagagaggggcatcggattaacgtc
ctctctctcacagatagatcgtctttatatacagtctctgatcgtcttggtcgtggtcct
cagagtatccacctgtcgttcctgaggaccgttcctccgtactcgcaccaggcgagcgtc
tggttcgacctgatgagggagttcaggtggaaccacatcatcctgatcgtgagcgatgac
cacgagggccgggccgcccagaagagactggagacgctactggaggagagagagaccaag
aataaaaacaggaactatgaaaacatcgaccaacagcactttgacttccggagaactccc
aaggcggaaaaggtgctgctgttcagccaggacaccaacctgacggctctgctgctggag
gccaaagacctggaggctcgcgtcatcatcctgtctgccagcgaggacgaagctgcagct
gtgtacaaagcagctcgtcagctcaacatgaccggctctggttacgtctggctcgtcgga
gagagagaaatgaccggcaaagctctgagcgaagctcccgatggcctcctgggcctccag
ctgattaacggaaagaacgagtcggctcacatcgcggacgccgtggcggtggtggctcag
tctcttcaggagctgtttgagaaggagaacatcacggagcctccgcggggctgcgtgggg
aacaccaacatctggaggaccgggccgctcttcaaacgggtgctgatgtcatcaaagtac
cctgacggtctgacggggcggatcgagtttaacgatgacggcgatcgacgtttcgccacc
tacagcatcctgaactaccaacagaaaccaggtcgcctcgtccaggtcggagtcttcaac
ggttcacaggttgtgatgaaccctcagaggaagatcatctggcctggaggagagacagag
aaaccagtcggataccagatgtcgaccaaactgaagatcgtgaccatccaccaggagccg
tttgtctacgtgaagccgacaaagactgacgggacgtgtaaggaggagtacaccctcaat
ggagtcttgatcaagaaggtgatctgtaccggacccaacgggaccataccaggtcagccc
accgtccctcagtgctgctacggtttctgcgtcgacctgctcatcaagctggcgatgagc
atgaacttcacctacgaggttcacctggtggctgatgggaaatttggcacgcaggagcga
gtcaacaacagtaacaagaaggagtggaacgggatgatgggggagctgctcggaggcctc
gctgacatgatcgtggcccccctcaccatcaacaacgagcgcgctcagtacatcgagttc
tccaaaccctttaaataccaggggctcaccatcctcgtcaagaaggagatccctcgcagc
actctggactcattcatgcagccgttccagagcacactgtggctgttagtcggtctgtcg
gtccatgtggtggcagtgatgctttacctattagaccggttcagcccgtttggaaggttt
aaagtgaacagtgaagaagaagaagaagacgccctcaccctgtcctctgccatgtggttc
tcatggggagtattgctgaactctgggatcggagaaggagctcccaggagtttctcagcg
aggattctgggaatggtgtgggcaggattcgctatgatcatcgtggcatcgtacactgcc
aacctggcagccttcctggtgctggaccggcctgaggagcgcatcactggcatcaacgac
cccaggctgcgtaacccatcagataagttcatctacgccacagtgaagcagagctcggtg
gatatttacttcagacggcaggtggagctgagcaccatgtaccggcacatggagaaacac
aactacgagagtgccgctgaggccatccaggccgtcagagacaataagcttcatgccttc
atctgggacagcgctgtgttggagtttgaggcatcacagaagtgcgatctagtgacgaca
ggagagctgttcttccgctccgggttcgggattggaatgaggaaagacagtccgtggaaa
cagaacgtgtctctggctattctcagttctcacgagaacggcttcatggaggatttggac
aagacgtgggttcgctaccaggagtgcgactcccggagcaacgccccggctaccctcacc
tttgagaacatggcaggtgtgttcatgctggtcggcggcggcattgtcgccgggatcttc
ctcatcttcattgagatcgcctacaagcggcacaaagacgcccggaggaaacagatgcag
cttgcctttgccgcggtgaacgtgtggaggaagaacctgcagccgtacccgactgacatc
accggccagcttaacctatcagatccctccgtcagcaccgtggtctga
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