Scophthalmus maximus (turbot): 118316898
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Entry
118316898 CDS
T09850
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00531
Glycosaminoglycan degradation
smau01100
Metabolic pathways
smau04142
Lysosome
Module
smau_M00076
Dermatan sulfate degradation
smau_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118316898 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118316898 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
smau02042
]
118316898 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118316898 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
118316898 (si:dkey-72l14.3)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118316898 (si:dkey-72l14.3)
Bacterial toxins [BR:
smau02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118316898 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Enzymes
118316898 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smau00537
]
Enzymes
118316898 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Trypan_PARP
MycE_N
Motif
Other DBs
NCBI-GeneID:
118316898
NCBI-ProteinID:
XP_035501052
EnsemblRapid:
ENSSMAG00025023252
LinkDB
All DBs
Position
3:17272943..17288322
Genome browser
AA seq
582 aa
AA seq
DB search
MAWTEPRSRPDREPELEPQLTPHRRTQISATTFSTTIPQVQPSIFVTVIILLLTAFADLC
AAGPARPPLLSGQPFIIFWGIPDSSCSGRIDPRSFGMEREGRVAVFYEDTLGNYPYFVDK
DTPVNGGLPQHTRLNNHLQKTQQDLEVALPAPRYLGLGVLRWAEWSPQWLRNREKQVMYL
EASRNLMKAFFPTWTPEEVEKWSQVDFEAAAQSVMMETLREAKKLRPKALWGVSPYPSCY
NGDPAQTLLANYSGQCPAAEMALNDELLWLWKRCSALYPLLTLEKLQGGTSGARLYSSSQ
IREALRVSSLTGMTFDLPVIPLVKSVYTSTNTFLSQTDLVNTIGESAALGTAGVVIWQRS
ETKTERECQDLGEFVRQVLGPYSVNVTTATRLCSASLCQGKGRCVRQTPESSAYLHLPPP
PDVVEKVTEKPEAAKATDQPETDTKPAEPEPEPEPDPDPDPDPAEIWKKDFQCQWYKTAD
GDVSDQQSPKDGASLGGKAEEPAGGVVRPTSASTTASTTKGASVTEVRGSGSPGTASPAP
SLGASSPAPSLEASTDGGTSPPSAPRLTLLLLLVIGRLCLEP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaccgagccacggtcgcgtccagaccgagagccagaactagaaccacaactg
acacctcatcgcaggactcaaatatcagccacaaccttttcaacaaccattcctcaagtc
cagccttcgatttttgtgaccgtcatcatcctcctgcttactgcctttgctgacctctgt
gcagctggtccagctcgcccccctctcctgtctggacagcctttcatcatcttctggggc
atccccgactcgtcttgctccggtcggatagatcccagatcttttgggatggagcgggag
ggccgcgtggctgtcttttatgaggacacgctggggaactacccatattttgtagacaaa
gacactccggtcaatggggggctgccgcaacacacgcgactcaacaaccacctccagaag
acacagcaggacttggaggtagctttacctgcgccaaggtatctcgggttgggggtgctg
cggtgggcagagtggtccccccagtggttgaggaatcgagagaagcaggttatgtatctg
gaagcatcgaggaacctgatgaaggccttttttcctacctggaccccggaggaggtggag
aagtggtcgcaggtggacttcgaggcagcagcccagtcagtaatgatggagactctacgg
gaggcgaagaaactacggcccaaagcattatggggcgtctccccttaccccagctgctac
aacggcgaccccgctcaaaccctgttggccaattacagcggccagtgcccggctgcagag
atggcacttaacgacgagctgctgtggctgtggaagcgatgctccgccctctacccgctc
ctcactctggagaagctgcagggcgggacctccggggccaggctctattcatccagtcaa
atacgagaagcactacgagtatcctctctgaccgggatgacgtttgatcttcccgtaatc
ccactggtcaagagcgtctacacctcaactaacactttcctatcgcagacggacctggtc
aacactataggagaaagtgctgcattgggaacagctggagttgtcatctggcagagaagt
gagactaaaacagagagggagtgccaggacctgggagagttcgtccgccaggtcctggga
ccctactccgtcaacgtgaccacggcaacgcgactctgctcggcctccctctgccaggga
aagggccggtgcgtccgtcagacgccagagagctcggcctatctccacctcccgccgccg
cccgacgtggtggagaaggtgacggagaagccagaggcagcaaaagccacagatcagcca
gagacagacaccaaaccggctgaaccagaaccagaaccagaaccagacccagacccagac
ccagacccagcggagatatggaagaaggacttccagtgccagtggtacaagacggcagac
ggcgacgtctcagaccaacagtcgcccaaagacggcgcgtctcttggggggaaagcagaa
gaacccgctgggggagtcgtgagacccacttctgcttctacgacagcgtcgacgacaaaa
ggtgcctccgtgacggaggtaagaggaagcggttcaccaggtactgcgagtccggcgcct
tcgctgggggcatctagtccggcgccttcgctggaggcatctacagacggtggtacaagt
ccaccgagtgccccacgcctgactctcctgctgctgctggtgatcggacgtctatgcctc
gaaccttaa
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