Scophthalmus maximus (turbot): 118318184
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Entry
118318184 CDS
T09850
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118318184 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118318184 (tprb)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118318184 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118318184
NCBI-ProteinID:
XP_035503487
EnsemblRapid:
ENSSMAG00025004683
LinkDB
All DBs
Position
13:7135361..7156134
Genome browser
AA seq
2362 aa
AA seq
DB search
MAALLLQEFEESEISKIPKPIQGKLERILSDQQNEIDSLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEEFLSQTQEHLKLKEEFTKRDEELKTIREKNREYESVKERLSSEQTLLSKAKEEL
EAEKRDLVRTLDRRSLEVEHVNDDLRQLNDKLVEVSTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLHGQTSWLNEELKAKSEELLSLSRKKGNEILDLKCTVENKEDELNRLQDQV
ASLKTSNENLQRQNEDVISKLKDVKEQQATEEEKFRNELNANIKLSNLYKGAAADAEAKS
EELSRAVEELHKLLKDAGEANKALEEKLQERSGATDKTVAELKERIQGLEKELDNANDLL
SSSKLRGTTSLLTEEQMTTMSPTAAAVSKIKPGMKLTELYTAYVESQEQLQLERLENKRV
NKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQRETDEANKRS
SVLERDNQRCELQLGDMAQQVRVLLIELEEARGNHVLHEEDVNSADVSSTSEVISQHLVT
FRSVEELQSQNQRLLVALRELSDAQEKDEFEATGSKCGHLEQSLEKAQGELDSLKEQRSQ
QLKMTESIVRQRDMYRMLLAQATGVSFPQQGAPPDEFSLTSTPRRSPAATPTTGTPTGLV
SMATESAEALEAKAALRQLQEVFSTYKKECVDSDKALTAQNEKLQEQLSDLRSQNTKIST
QLEFASKRYEMLQDNVEGYRKEIASLREKEHKMAAATQKQEQTIHILNEDLRAAKEKLAM
SEGCAEGLRKERDMLKLVESRLTQETETIRSQQQSQNLLLTNLQTIQATLERSETDTRQR
VNCQLEKQEREISQLQKRLENEVEQRHLLIRNQDIQLMEAKRQMETQAASQQKTKELLNA
AELELNTLRLQQGGSEARHILSSPSTQNIRGLQGSDQDIEVLKGRLRLAETKGEELAESL
QAVTSSQEQYRAMAQSLEESLDKEKQVTEQARSSIEAHVKQAEEQHRKLEEKLLEAEKEK
RGLEEQNKRATASLEEQMNNLRRSLSDAQADHQAALQRVELAETQQQQALQGSQEQAKLA
AEAQDKYEREMMLHAADVEALQAAKAQSQQAVELRHQLEERVQRVSTELLEARISWEEQE
KIFKEEMSKIESRCEELQRQNALLHEQIQTMSSKMADNLQRSSNESTLNISLTEEGKSQD
QVLEILRFVRREKEIAESRFEVAHGESLRYRLRVEQLERELKEVQDSLSAASERMQVTAK
TLAQHDELMKKTETMSILMETNKMLREEKDKMELELHQTQAKLQKLQSDIMPLQQANTEL
SEKSGTLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQLTEE
NTRLKADVSRTNNLTTSLQGQIQNLRDSMSKTTDERNLLKKEMDTKNQDIQVKERTIMQV
KKIGRRYKTQYDELKVEHDKMVAEAAAVPSQEEEARQASVQELQSLRDSLSQSEARTKEL
EGQLENINKVVTEHDTEVRNAQEQTSRLQAELTRLRQELQSKVAQEETVRQQMADKDEKT
RKGIVYARQRISQLTRINDELKQQLEEGEVRMTALKSQYEGRLSRQERELRDRRGQQERQ
EQRDEPPDAGPSKTQEQQRNTEQRQISLKTTPAADRGSACTSEPPTANIKPTPVVASGSK
QPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGPPVEHVTVYG
SASGSVRSASPNVQTTLTSPMLTVQQTQTQTQATAFVQPTQQQSMTHTEPANQEPPPVVI
EATPSSQVEWPSTSSTSSVFGTVSATPGTSTMSKRPREEEDSTTMVTDTEVAQEETSRAP
IPKKLRIIQRVGPEEEVQAEESAEAEGVVPTDSQDSAEASQMEEFPALEEGEDSAASQSM
TMDQEMTLTQSDTPDQLSQEVIVIITDTESDEDQEEGDEEDEEQDYDEEEEEEDDEEEEE
EEDDEEEDEGGMGEEGEESNEGSGDGNEAYEEDDTECADATDPGTETEESLGASDSTQRP
ADSQTPSFEGSSMEAFSTEQSISSSGTRMPQSPRRPTHQLPARLNTHPATTSELGPSAQR
NAGRRQAVGRVPQLTAGLPVSSQHFFDEDDRMVPSAPTLVVPHRDGFDQAIHSPQVAGVP
RFRFGPSDEMPQTSSSSQSDLGQLASQGGLGMYESPLFLSTHEEESGGRSVPTTPLQVSA
PVTIFSEVAQSDTTEHASQSVPMVSTSTPGLVVPGAAGTGEERDDVLLEPDADRPSAEAS
MDAVVSQGDVEEQSQPSDKASLPSTSQEPSSSSADTSSAPPKPSRPGTSRQLQRWPESRG
GRMKRGGQAFPSRGQHGRRFAR
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagttcgaggagtccgagatatctaagattccaaaacca
attcaaggcaaactcgagaggattctttccgatcagcagaacgagatcgactccttgaaa
gcgcagcaggagcagttccgtgttgacagcgagcaacatttctttgaaaaagtgaaacaa
cttgcccaatgccaggaagaatttctgtcccagactcaagaacatcttaaactcaaagaa
gagtttaccaagcgtgatgaagaacttaaaactatccgtgagaaaaacagggaatatgag
tctgtcaaagagaggctgtcatcagagcaaactctgctgtcaaaggccaaagaggaactg
gaagcagaaaaacgtgatcttgtgcgaactctcgataggagatccttggaggtggagcac
gttaatgatgacttgaggcaactcaatgataagttggtggaagtcagcacctccaagatg
gccctgcagatgaagttggatgagcttgaagcagctgaagtcaacattaaatacaaggag
aagcgtatggaacaagagaaggagcttctgcatggccagacatcttggctgaatgaggag
ttgaaggcaaagagtgaggagctgctctctctctcccgaaagaagggcaacgagatcctg
gatttaaaatgcacagtggagaataaagaggacgagttgaaccgactccaagaccaagtg
gccagtttgaagacttcaaatgaaaaccttcagagacagaatgaggacgtgatcagcaaa
ttgaaagacgtcaaggaacaacaagccactgaggaggaaaagttcagaaatgagttgaat
gccaacattaagctctccaatttatataagggagcagcggctgatgctgaggcgaaaagt
gaagagctgagtcgggctgtggaggagctacataaactgttgaaggatgccggagaagcc
aacaaggcccttgaggagaagttacaggagaggagcggtgccacagacaagactgtagct
gaactgaaggagaggatccagggtctggagaaagagctggacaacgccaatgatttactg
tcaagttctaaactcagaggtacaacatctctgctgacagaggagcaaatgacaacgatg
tctccaacagcagccgctgtgtccaagatcaagcctggtatgaagctgacggagttgtat
actgcctacgtggagagccaggagcagctgcagctggagcgcttggagaacaagcgggtc
aacaagtacctggatgacatagtgcaggaagtggaagcaaaagcccccatcctcaagcgg
caaagggatgagcatgagcgcatgcagaagtcagtggccagtctttctgccaagctggag
caggctgtaaaggaagttcaccgtctgcagagggagactgatgaagccaacaagcgctcc
tctgtcttggaaagagacaaccagaggtgtgaactgcagctgggagatatggctcagcag
gtgcgtgtgctgctgatcgagctggaagaggctcgtggaaaccatgttctccatgaggag
gatgtgaactcagccgacgtcagcagcacatcagaggtgatcagtcaacatttggtgacg
ttccgcagtgtggaagagcttcagagtcagaaccagcgtcttctggtggccctcagggaa
ctcagtgatgcccaagagaaagatgagtttgaggccactggcagcaagtgtggtcatctg
gagcagagtttggagaaagctcagggtgagctggattccctgaaagagcagcgcagccag
cagttaaaaatgaccgagtccatcgtcaggcagagggacatgtaccgcatgctgctggct
caggcaactggagttagctttcctcagcaaggtgcaccacccgacgagttctccctgacc
tccacgcctcgacgctcacctgcagccactcccaccacaggaacgcccactggtcttgtg
tccatggcaacagagtctgctgaagcactggaggccaaagcagccttgcgacagttgcag
gaggtgttctccacctataaaaaggaatgtgtggacagtgacaaggcgctgacggcccag
aacgagaagctccaggagcaactctctgatctccgctcccagaacaccaagatatccacc
cagctagagtttgcctccaaaaggtacgagatgctgcaggacaacgtcgagggctacagg
aaagagatcgcctccctaagagagaaagaacacaagatggccgctgccacccagaagcag
gagcagactatccacattttgaatgaggatctgagagctgccaaagagaaacttgccatg
tcagagggctgtgctgagggcctgcgtaaggagagagacatgctgaagttggtggagtct
aggctgactcaagagacggaaacaatccggagtcaacaacaaagccagaacctgctgctg
accaacctccagactattcaggccactcttgaacgttcggagactgacacacgtcagcgt
gtcaactgccagttggagaagcaagaacgggagatctcccagctgcagaaaaggctggag
aacgaggtggaacagcgccacctgctcatcagaaaccaagacatccagttgatggaagca
aagaggcaaatggagacccaggcggcttcacaacagaagaccaaagagttgctgaacgct
gccgagttggagctcaacacactcaggctgcagcaaggcggcagcgaagcacgtcatatc
ctgagttccccctccacgcaaaacatcagaggcctgcagggctcagaccaagacatagag
gtccttaagggccgcctgaggttggctgaaaccaagggagaggagctggcagaaagcctc
caagcagtcacctccagccaggagcagtacagagccatggctcagagcctggaagaatcc
ctggataaagagaagcaggtaactgagcaggcacgctcatccatcgaagcccatgtgaag
caggctgaggagcagcaccgaaagctggaggagaagcttctggaagcagagaaagagaaa
cgaggcttggaagagcaaaacaagagagccacagcgtcactggaggaacagatgaacaac
ttaaggagaagtttaagcgatgcccaggcagatcaccaggcggcgctacagcgagtggaa
ctggctgaaacccagcagcagcaggctctacaaggcagccaggagcaggctaagctggca
gcagaagcacaagataagtatgagcgggagatgatgctgcatgcagcagatgtggaggcc
ctgcaggccgctaaggctcagtcccagcaggccgtcgagctcagacaccagctggaagag
agagtgcagagggttagcaccgagctactggaggcgcgaatctcctgggaggagcaggaa
aagatcttcaaggaggagatgtcaaagatcgagagtcgctgtgaggaattgcagaggcag
aatgctctcctgcatgagcagatccagacgatgagcagcaagatggctgacaatttgcag
cgttcttccaatgagagtaccctgaacatctccctgactgaagagggcaaatctcaagac
caagttcttgagattctcaggtttgtgcgtcgggagaaggagatcgctgaatcccgtttt
gaggttgcccacggtgagagtttgcgttatcgtctgcgggtggagcaactggaacgagag
ctaaaggaggtgcaagacagcttgagtgctgcaagtgagaggatgcaggtgacagcaaag
accttggctcagcacgacgagctgatgaagaagaccgaaacgatgagtatcctgatggag
accaacaagatgctgagagaggagaaggacaagatggagctggaactgcaccaaacccaa
gctaagttgcaaaagctgcagtcagacatcatgccacttcagcaggccaacactgagctg
agtgagaagagtggcacactgcaggcagagaagaagatactggaagaagagatcaaacgc
tggaaggctcggacgcagcatttggtgagtcaacagaaagattccgacccagaggagtac
aagcgtctgcactctgagaaggaggctcatctaaagcgcatccagcagctcactgaggag
aacaccagactcaaagcagacgtgtccaggaccaataacttaacaacatccctgcaaggt
cagatacagaacttgcgtgacagtatgagtaagacaactgatgagagaaatttgctgaag
aaggaaatggataccaagaaccaggatatccaggtgaaggagcgaactatcatgcaggtc
aagaagattggacgccgctataagactcagtatgatgaactcaaagtggaacatgacaag
atggtagctgaggcggcagcagttccttcccaagaagaggaggctcgtcaggcatcggtt
caggaactccagagcctcagagactctctgagtcagtctgaagccaggaccaaagagctg
gaaggacagctggagaacataaacaaggtggtcacagagcacgacactgaagtgcgtaat
gcccaggaacagacctccaggctgcaggcagagttgaccaggctgaggcaggaattgcag
agtaaggttgcccaggaggagacggtgaggcagcagatggccgacaaggatgagaagacc
cgaaagggcattgtttatgccagacagaggatcagccagctcacacgcatcaatgatgag
ctaaagcaacaacttgaggagggcgaggttcgaatgactgctctaaagtctcagtatgag
gggcgcctgagtcggcaggagagggaactgagagatcggcggggtcaacaggagagacaa
gagcaaagagatgagccacctgatgcagggcccagcaagacccaggagcagcagaggaac
actgaacagagacagatcagtctgaagacgactccagctgcagacaggggcagtgcctgc
acctctgaacccccaactgctaacatcaagccaacgccggtagtcgcttctggcagcaag
cagcccgtcaacccagggaacaaacccactccaagagccagcatcaggcccatgatcacc
ccagcgactgtacccacaccaacacccacagctactgtcatgcccactacacaggtggag
acccaagaagccatgcagtctaccgagggcccaccagtggagcacgtgactgtgtacggc
agtgccagcggttcggtgcgctctgccagccccaacgtacagaccactttgactagcccc
atgttgaccgttcagcagacccagacgcagacgcaggcaacggcatttgttcaaccgacg
cagcaacagagcatgacccatacggagccagccaatcaggagccaccgcctgtggtcatc
gaggcaacaccgagttcacaggtggaatggccttcgacttcctccacctcgtctgtgttc
ggcactgtttcagcaacaccaggaacttccacgatgtccaagaggcctcgagaagaggag
gatagcaccaccatggtcactgacactgaagtagctcaggaggaaacatccagggctcct
atacccaagaagctgcgcatcatccagagggtgggtccagaggaggaggtgcaggctgag
gaaagtgctgaggctgagggtgtggtgccaacagacagtcaagacagtgccgaggcaagc
cagatggaagagttcccagcactggaggaaggagaggacagtgcagcctcccagtccatg
acaatggaccaagagatgaccctgacgcaaagtgacacccccgaccaactgtcacaggaa
gtaatcgtcataataacggacacggagagtgacgaagaccaggaagagggggacgaggag
gacgaagagcaggactatgatgaggaggaggaagaggaagatgacgaagaggaggaagaa
gaggaagatgacgaagaggaggacgagggagggatgggggaggaaggagaggaaagcaac
gaggggagcggggatggcaacgaggcttacgaagaagatgacacagagtgcgctgatgca
acagacccgggcacggagacggaggagagtctgggggcgtccgactccacccagaggccc
gcggattcccagacacccagcttcgagggcagctcgatggaggccttctcgacagaacaa
tccatctcgagctctggtacacgcatgccccagtcgccacggagacccactcatcagttg
cccgcccgcctcaacacccaccctgctacaacatccgaattgggaccgtccgctcagcgc
aatgctggtcgtcgtcaggccgtggggagagtccctcagctcactgctgggctgccggta
agctctcagcacttcttcgatgaggatgacaggatggttcccagcgctcccactctggtg
gtaccacaccgcgatggttttgaccaggccatccattctccccaggtggctggtgtgcct
cgctttcggtttggtccctcagatgaaatgccccagaccagctcctcgtcgcaatccgat
ctgggacaactcgcatcacaaggaggtcttgggatgtatgaaagccccttgttcctatca
actcatgaagaagagtcgggtggacgcagtgttcccaccacaccactacaagtctcagca
ccagtaaccatcttctccgaggtggctcagtctgacaccactgagcacgcctcccagtcg
gttcccatggtgagcacgtccacgccaggcctagtggtgccaggagcagccggtacaggg
gaggagagggatgatgtcctcctggagcctgacgctgataggcccagtgctgaagcgtca
atggatgcggtggtgtctcagggagatgtggaggagcaaagtcagccctccgacaaggcc
agcctcccctccaccagccaggagccctcctccagctctgcagacacaagcagtgctcca
cctaaaccctctagacctggaaccagcagacagctgcagcgctggccagagagccgtggg
ggacgtatgaagagaggaggtcaggcatttccatctcggggacaacacgggagacgattt
gccagatga
DBGET
integrated database retrieval system
