KEGG   Scophthalmus maximus (turbot): 118318583
Entry
118318583         CDS       T09850                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03020  RNA polymerase
smau03420  Nucleotide excision repair
smau04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118318583 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118318583 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    118318583 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smau03021]
    118318583 (polr2eb)
   03400 DNA repair and recombination proteins [BR:smau03400]
    118318583 (polr2eb)
Transcription machinery [BR:smau03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     118318583 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     118318583 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     118318583 (polr2eb)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118318583 (polr2eb)
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 118318583
NCBI-ProteinID: XP_047192561
EnsemblRapid: ENSSMAG00025025158
LinkDB
Position
13:complement(17314164..17316902)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgatgaagaggaaacatacagactgtggaagattcgcaaaaccatcatgcagctg
tgccacgaccgaggctacctggtgacacaggacgagttggaccagacgctggatgagttc
aagagtcagtttggagacaaacccagcgagggtcgccccagacgcacagacctcacggtg
ctggtggcgcacaacgatgaccccacagatcagatgttcgttttcttccctgaggagccc
aaggttggaatcaagacgatcaagatgtactgccagaggatgcaggaagagaacatcacg
cgagccatcatcgttgtgcagatgggcatgactccctcggccaaacagtctctagtcgac
atggcgcccaaatacatattggagcagtttctacaacaggagctgcttatcaacatcacc
gagcacgagcttgttccagaacacatcgtcatgacaaaagaggaagtgactgaacttctg
gcgagatataaattaaaagagagtcagttgccgaggatccaggctggggaccctgtggct
cgctactttggcttgaaaagaggacaggtcgtaaagatcatcagaccgagtgaaacagcc
gggaggtacatcacatacagactggtccagtga

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