Shewanella marisflavi: CFF01_05565
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Entry
CFF01_05565 CDS
T05400
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
smav
Shewanella marisflavi
Pathway
smav00730
Thiamine metabolism
smav01100
Metabolic pathways
smav01240
Biosynthesis of cofactors
smav04122
Sulfur relay system
Module
smav_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CFF01_05565
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CFF01_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_05565
Enzymes [BR:
smav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CFF01_05565
Transfer RNA biogenesis [BR:
smav03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CFF01_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Gifsy-2
Motif
Other DBs
NCBI-ProteinID:
ASJ96092
UniProt:
A0A4Y6IZX9
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All DBs
Position
1246280..1247737
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AA seq
485 aa
AA seq
DB search
MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLRKVDEEAKVQRQWDKIMVRVPEDKPE
MIERYAERLACIPGIAHVLQVRESTFESVDDIYQQTLALYKEQLAGKTFCVRVKRSGQHD
FNSIEVERYVGGGLNQFTEAAGVRLKNPDMTVNLEIDKENLYLVEKRIQGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISVPFDPVVQEILEKVDNGQMGVILKRMMMRAASLIAEKMGIQALVTGEAMGQVSSQTL
TNLNVIDRSTDMLILRPLIVMDKQDIINISREIGTEDFAKSIPEYCGVISQKPTVKAVMG
KILAEEEKFSEDLIERVVAAAEVIDIRDIAASMDTKITETETVDAVSGGEVVVDIRAPEE
EEQSPLALDGIEVKCIPFFKLATQFADLDKEKTYLLYCDRGVMSKLQALYLQEQGYHNVK
VYRPV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactgtttcctgaaatcatgatgaaaagcaaaccggtaagaatg
cgttttaccaagatgcttgaaaccaatatccgcaatgtgctgcgtaaggtcgatgaagag
gccaaagtacagcgtcagtgggataagatcatggtcagggtgccagaagacaaaccagag
atgattgagcgttatgccgagcgtctcgcctgtattccaggtattgcccatgttctgcag
gtgcgcgagagcaccttcgagtcagtcgacgatatctatcagcaaaccttggcgctttat
aaagagcagttagccggtaaaacgttttgtgtgcgggttaagcgtagtggccaacacgat
tttaactcgatagaggttgagcgttatgttggtggtgggctaaatcagtttaccgaagcg
gctggggttaggcttaagaatcccgatatgacggtcaaccttgagatagataaggaaaac
ctttatctggttgagaagcgtatccaaggtctgggaggcttcccgatggcaactcaggaa
gatgtattgtcattgatctctggcggcttcgactctggcgtttctagtttccagtttatc
aagcgtggttctcgtacccattactgtttctttaatctgggcggcgaccagcatgagatt
ggtgtgaagcaggtggcctatcatctgtggcagaagtatggcgagtcacacaaggtgaaa
ttcatctcagttccctttgaccctgtggtgcaggagatcctagagaaggtcgataacggt
cagatgggggttatcctcaagcgtatgatgatgcgtgccgccagccttatcgccgagaag
atgggtattcaggccttggtgacgggtgaagctatggggcaggtctcgagtcagaccctg
accaatctaaacgtgattgaccgcagcacagatatgttgattctgcgtccgctgatcgtg
atggataagcaagacatcattaatataagtcgcgagataggtactgaagactttgccaag
tcgatccctgaatattgcggtgttatctcgcaaaagccgacggtgaaagctgtgatgggt
aagattctcgccgaggaggagaagttctccgaagacttaattgagcgagtagtggctgcc
gccgaggtgattgatattcgcgatatcgctgccagcatggatactaagatcaccgagact
gagacggttgatgcggtgtcgggcggtgaagtggtggtggatattcgcgcaccggaagag
gaagagcagagtccgcttgcccttgatggcatagaagtaaagtgtattcccttctttaag
ttagcgactcagtttgccgatctggacaaagagaagacctatctgctttattgcgataga
ggcgtcatgagcaagctacaggcgctttaccttcaagagcagggatatcacaacgttaag
gtctatcgtcctgtatag
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