Shewanella marisflavi: CFF01_07250
Help
Entry
CFF01_07250 CDS
T05400
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_07250
Enzymes [BR:
smav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CFF01_07250
Transfer RNA biogenesis [BR:
smav03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CFF01_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
NAD_binding_9
Pyr_redox_2
FAD_binding_2
Pyr_redox
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ASJ96401
LinkDB
All DBs
Position
complement(1656653..1658689)
Genome browser
AA seq
678 aa
AA seq
DB search
MPNIPLRVNSLTTEHPDNAQIIDDKRTLNSFLSHLSTITLDAPQQVIGVVTTKGGQWLST
LLSLLYFKVTSQDKRYQLQLYTKTDAQTLAQIAANSQLPGATNQQLKDIASAHISGCHRL
TLADGKLIIDLHLGTALEQLKAQISAKDPDKAVHAWLFDTDEAICQAPEPLIWQLARLSC
PSAPLFTFSDTREKESASRIGPLSQAANKAGFQLCELNLATKDDQCVTIKSVPSNPALDI
AQQERRALRRQLSDSLHYNPLYAGGEGETAIIGGGVAGASLALSLAERGKSLTFFCMDEA
PGQQASGNKQGAIYPLLTPEHGSLSHYFLQGYLFSRQRILQLIEAGHDIPHDFCGVLQTG
HDQRSQQRLEKIIRAQPWAESIAQAVDAEKAKSLAGIAINHQGIYYPLGGWVSPQALTRA
ALAQAEKLGKQTCHYQCKVTDIRYDQGHWYLSTEHAGKQAEYGPFANLVLANGRHLTDFS
QTTQLPISGFRGQVSHIPSRGELTALKTVLCSHGYLTPAHDKLHCTGASYVKDPDNLAYS
PTEQLENLDKIRTSYRANWTQDVDISGHSARIGVRMVTRDHAPMMGCAPDFDAIASAYRQ
HQHTKESIKYWRSNPAPVYQGLFVLGGLGSRGLTSGPLAAEILAAQLCGELLPANIDVLT
MLNPNRMWMRKLLKGKAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcccgttgagagtaaattcattgactaccgaacacccggataacgcacaa
attattgacgacaagcgtacattgaactcatttttaagccatttatcgacaattacactg
gatgccccgcagcaagtgatcggtgttgtcaccactaaaggtggccaatggctgtccact
ttactgtcgctcttgtattttaaggtaacgtctcaggataagcgctaccaactgcagcta
tataccaaaactgatgctcaaacattagctcagatagcagcaaattcacaactgcccggc
gcgacaaaccaacagcttaaggatatcgcctctgcccacatatcaggatgtcaccgtctc
acgcttgctgacggtaaactgattatcgatcttcatctgggcaccgcacttgagcagctc
aaggcgcagatcagcgccaaagatcccgataaagccgtgcatgcctggttgttcgatacc
gatgaggcgatatgccaagcccctgagccgcttatctggcaactcgcacgcttaagctgc
ccatcagccccgctttttaccttcagtgatacgagggaaaaagagtccgcctcaaggatt
ggaccactgtcacaggcggctaacaaggctggatttcagctctgtgaactcaatttagca
accaaagatgaccagtgtgtgacgattaaatctgtccccagcaacccagcgctggatatt
gctcagcaggaacgccgtgcactacgtcgtcagctaagcgacagccttcactataatccg
ctttatgccgggggcgaaggcgaaacggcgattatcgggggcggtgttgccggagccagt
cttgctctgtcgctcgcggaacgcggcaaaagcctgactttcttttgtatggatgaggcg
ccgggacaacaggcctcaggtaacaaacaaggggccatctatccactgctcacgccggag
catggcagcctgagccactattttttacaaggctacctctttagccgtcagcgtatcttg
cagctgatcgaggcggggcatgatatcccccatgatttttgcggcgtcttgcaaaccggc
catgatcaacgtagccagcaaaggcttgaaaaaatcatcagggcccagccttgggccgag
tcaatcgcacaagccgtcgatgccgaaaaagccaagtcactcgccgggatagcaatcaac
catcaggggatctactatcccttaggaggctgggtatcccctcaagccctgacccgcgcg
gccttagcccaggcggaaaaactcggtaaacaaacctgtcattatcaatgcaaggtgacc
gacatacgatatgaccaggggcattggtatctaagtactgagcatgcaggaaagcaggcc
gaatatggtccctttgctaacttagtgctggctaatggccgccacctgaccgacttttcc
caaacgacccagctaccaattagcggttttcgcggccaggtcagccacatcccatccaga
ggagaactgacagccctcaagacggtactctgctctcatggctacctcactccggcccat
gacaaactgcactgcacaggggcgagctatgtcaaagatcccgataatctggcctacagc
ccaacggagcagctggagaatctggataagatccgcactagctatagggctaactggact
caagatgttgatatctcaggccatagcgcccgcattggtgtacgcatggtcacccgagat
cacgctcccatgatgggctgcgcgccagactttgacgcgatagccagcgcttatcgacag
catcagcacaccaaagaaagcatcaaatattggcgcagtaatcccgcgcccgtatatcaa
ggcctgtttgtgctcggaggactgggttctcgcggcttaacttctggtccactggcagca
gaaattttagcagctcagctgtgtggcgaactgctacccgccaatatcgatgttcttacc
atgctcaaccccaaccgtatgtggatgagaaaattactgaaaggcaaggcgctatag
DBGET
integrated database retrieval system
