Shewanella marisflavi: CFF01_13260
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Entry
CFF01_13260 CDS
T05400
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
smav
Shewanella marisflavi
Pathway
smav00362
Benzoate degradation
smav00620
Pyruvate metabolism
smav00650
Butanoate metabolism
smav01100
Metabolic pathways
smav01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
CFF01_13260
00650 Butanoate metabolism
CFF01_13260
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CFF01_13260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_13260
Enzymes [BR:
smav01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
CFF01_13260
Transporters [BR:
smav02000
]
Other transporters
Primary active transporters [TC:
3
]
CFF01_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
SBF
Motif
Other DBs
NCBI-ProteinID:
ASJ97469
UniProt:
A0A4Y6J336
LinkDB
All DBs
Position
complement(2989435..2990568)
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AA seq
377 aa
AA seq
DB search
MDGLIAFWAESGIANFTSGQLFMMAVGVVLLYLAIARGFEPLLLLPIGFGAILANIPNGG
FTEEGGMLYYAYHVGIETGVFPLLIFMGVGALTDFGALIANPKMLLLGAAAQFGIFATLI
GAIALNAVPGFEFSMQDAAAIAIIGGADGPTAIFLASKLAPDLLGAIAVAAYSYMALVPI
IQPPIMKLLTTEAERQIKMEQLREVSKKEKIIFPLSVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSSTAQNELINLVTIFLGLAVGSKLSADKFLQVETLGILVLGAVAFGIGTA
TGVLMAKLMSKLSGGTINPLIGAAGVSAVPMAARVVNKVGLQANQQNFLLMHAMGPNVAG
VLGSAVAAGVLLAVLGG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggacggattaattgccttttgggcggaatcggggatcgccaatttcacttctggccag
ctatttatgatggcggttggcgtggtgttactctatctggctatcgccagaggatttgag
ccgctgttgctgttgccgataggctttggtgccatcttggctaacatccctaatgggggc
ttcaccgaagagggcggcatgctttactacgcctatcatgtagggattgaaaccggcgtc
tttccgctattgatcttcatgggggtcggcgccttgaccgatttcggtgcccttatcgct
aaccctaagatgttgcttctgggggcggcggcgcagtttggtatctttgccaccttaatt
ggtgctatcgctctcaatgccgtacctggttttgagttctcgatgcaagatgcggcggcg
attgccatcatcggcggcgctgatgggccaacggctatattcttagcctctaagctggcg
ccagatctgcttggtgcaattgcggtagcggcatactcttatatggctctggtacctatt
atccagccgcctatcatgaagctgctgacgacagaggccgagcgtcagatcaagatggag
caactgcgtgaggtgagtaagaaagagaaaatcatctttcctttgtcggtactagggttg
accatactcttcttgccggcagcaacacctttggtgggcatgttctgtctgggtaaccta
atgcgagagtctggtgtggtcgataggttatctagtacggcgcagaatgagctgattaac
ttagtcactatctttctgggtttggcggtcggctctaagctatcggcggataaatttctc
caggtggaaaccttaggtattttagtcttgggcgccgtggcttttggtattggtacggcg
accggagtgttgatggccaaactgatgagcaagttgtctggaggcactatcaatcctctg
attggtgcggccggtgtatcggctgtgcctatggcggctagggtggtcaataaagtaggg
ctgcaggctaatcagcagaacttcctcttgatgcacgccatggggcccaatgtagcgggt
gtcctgggctccgccgttgccgccggggttctcttagcggtattgggtggctaa
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