Shewanella mangrovisoli: K0H60_00320
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Entry
K0H60_00320 CDS
T09316
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay00071
Fatty acid degradation
smay00280
Valine, leucine and isoleucine degradation
smay00310
Lysine degradation
smay00362
Benzoate degradation
smay00380
Tryptophan metabolism
smay00410
beta-Alanine metabolism
smay00640
Propanoate metabolism
smay00650
Butanoate metabolism
smay00907
Pinene, camphor and geraniol degradation
smay00930
Caprolactam degradation
smay01100
Metabolic pathways
smay01110
Biosynthesis of secondary metabolites
smay01120
Microbial metabolism in diverse environments
smay01200
Carbon metabolism
smay01212
Fatty acid metabolism
Module
smay_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0H60_00320 (fadB)
00650 Butanoate metabolism
K0H60_00320 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0H60_00320 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0H60_00320 (fadB)
00310 Lysine degradation
K0H60_00320 (fadB)
00380 Tryptophan metabolism
K0H60_00320 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0H60_00320 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0H60_00320 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0H60_00320 (fadB)
00930 Caprolactam degradation
K0H60_00320 (fadB)
Enzymes [BR:
smay01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0H60_00320 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0H60_00320 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0H60_00320 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0H60_00320 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QYK09192
LinkDB
All DBs
Position
complement(75796..77946)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRQRKMSPLTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVVEQAATKGRADALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKNPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagacagcattaaacaacaatcaaacattcaggccttagtgctcacctcaggt
aaagatacctttatcgtgggtgccgatattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaacgccgtattcaacaaactcgaagat
ttacctttcccaaccgcttctgcgattaaaggtttcgccttaggcggcggttgtgaaact
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggtctacccgaaacc
aagctaggtattatcccaggctttggtggcacagtgcgtttaccacgtgtaattggtgct
gataacgcccttgagtggatcaccacgggtaaagatcaacgtccagaagatgccttaaaa
gtaggtgcggttgacgccgttgttgcgccagaggctttagaagccgctgccattcaaatg
ctaaaagatgcagttgcagaaaagcttgattggcaagcccgtcgccaacgtaagatgtca
ccactgaccttaccaaaactcgaagccatgatgtctttcactacggctaaaggcatggtg
tttgcggtggcgggtaaacactaccctgcaccgatggcggctgtcagcgtagtcgaacaa
gctgcaaccaaaggccgcgccgacgcactgcaaattgagcatcaagcatttatcaagtta
gcaaaaaccgatgtagccaaagcgttgatcggtatcttcttgaatgaccaattagtcaaa
ggcaaggctaagaaagcgggcaagctcgctaaagatgtgaaaagcgccgccgtattaggt
gctggtatcatgggtggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaggatatcgctcaacctgcattagatttaggtttaggcgaagccgccaaactgtta
tctgcgcaagttgctcgcggccgctctaccccagaaaaaatggctaaagtgctgaataac
atcactccagccttagactatgccccagtaaaacatgctgacgtggttgtcgaagccgtc
gttgagcatccaaaagtaaaggcacaagtactggcggaagttgaacaatacgtgagtgaa
gatgcgattatcgcctctaacacgtcaaccatttcaatcaacctgctcgccaagagcatg
aagaaacctgagcgtttctgcggtatgcacttcttcaatccagtgcacaaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgttgcctat
gccagcaaaatgggtaaaaaccctatcgttgttaacgattgcccgggtttcttcgttaac
cgcgtactcttcccttactttgctggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgataaagtgatggaaaagcaattcggctggccaatgggccctgcttacctg
ctagacgttgtcggcctagacactggccaccacgcacaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaatctggcaatgacgcgattgacgtgatgttcgaaaacaaacgt
ctcggtcagaagaatggtaaaggcttctacgcttactctgtggatagccgcggtaagcca
aagaaagatgtcgacccaaccagctacgagctgctgaaggccgcctttggtgagcaaaaa
gcattcgatgcagatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcatcacctgccgaagcggatatgggcttggtctat
ggtttaggtttccctcccttccgtggtggtgtattccgttacttagatactatgggcgta
gcaaactttgtcgccttagctgataaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgtgcccttgcagccaacaacggtagctactaccaagcctaa
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