Sinorhizobium medicae: Smed_3888
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Entry
Smed_3888 CDS
T00555
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K12454
CDP-paratose 2-epimerase [EC:
5.1.3.10
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00520
Amino sugar and nucleotide sugar metabolism
smd00541
O-Antigen nucleotide sugar biosynthesis
smd01100
Metabolic pathways
smd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Smed_3888
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Smed_3888
Enzymes [BR:
smd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.10 CDP-paratose 2-epimerase
Smed_3888
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
KR
adh_short
NAD_binding_10
NmrA
DUF4944
Motif
Other DBs
NCBI-ProteinID:
ABR62700
UniProt:
A6UGC0
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Position
pSMED01:345706..346827
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AA seq
373 aa
AA seq
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MSGRTVEKSRHLATPALSGKAGPILVVGGSGFVGSNLADSFLRDGEHVIVLDNLSRPGVE
RNLEWLVESHGRAVEAVTADIRDLAAIQPAFRNAKAVFHFAAQTAVTTSLQQPTEDFETN
ARGTLNVLEAARLAGRSSPVIFASTNKVYGALEHMEMRDVQGRYMPVDEATRAHGVGEAQ
PLDFCTPYGCSKGVADQYVLDYARSFGLPTAVLRMSCVYGPRQFGTEDQGWVAHFLIRAL
AGEPISIYGDGKQVRDILHVTDAVAAYRAVLKAIDGLKGRAFNLGGGPDNAVSIVEVLNE
IEILTGRRLSTGKSDWRAGDQLYFVADTRAIADAVGWRAGMAWREGLRNLYAWLVEDRVG
VGNIRRQQRRVPA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccggaccgtcgaaaaaagtcggcatctggcgacgcctgcgctctccggaaag
gcggggccgatccttgtcgttggaggcagcggcttcgtcgggagcaatctcgccgacagc
tttctccgtgacggcgagcacgtgatcgttctcgacaatctcagccgcccgggcgtcgag
agaaacctcgaatggctggtggagagccacgggcgcgccgtcgaggccgtcaccgccgac
atccgcgatctcgccgcaatccaacctgccttcaggaatgccaaggccgtattccatttt
gcggctcagacggcggtgaccacaagtctccagcagccgaccgaggatttcgagacgaat
gcgcgtggcacgctcaacgtgctcgaagccgcacgtctggctgggcgcagctcgcccgtg
atcttcgccagcaccaacaaggtctatggcgcgctcgagcacatggaaatgagagacgtg
cagggccgctacatgccggtcgacgaggcgacgcgcgcgcatggcgtcggcgaggcgcaa
ccgctcgatttctgcacgccctatggctgttcgaagggcgttgccgatcagtatgtgctg
gactatgcccgctcctttggcttgccgaccgccgttctcagaatgagttgcgtctatggc
ccgaggcagttcggcacagaggatcagggctgggtagcgcacttcctcatacgggcgctc
gccggcgagccgatctcgatctatggcgacggcaagcaggtccgcgacatcctccatgtc
accgatgcggtcgccgcttatagagcggttcttaaagcgatcgacggtctgaagggtcgc
gctttcaatttgggaggcggacccgacaatgccgtcagcattgtcgaggtgctgaacgag
atcgagatcttgacgggccgtcggctctctaccgggaaaagcgactggcgcgccggcgac
cagctgtattttgtggccgatacgcgcgcgatcgccgatgcggtcggctggagggcggga
atggcttggcgcgaggggctgcgcaatctttacgcctggcttgtcgaagatcgggtcggc
gtcggaaatatccggcgtcaacagcggagggtccctgcatga
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