Sinorhizobium medicae: Smed_4621
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Entry
Smed_4621 CDS
T00555
Name
(GenBank) Xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00230
Purine metabolism
smd01100
Metabolic pathways
smd01120
Microbial metabolism in diverse environments
smd01232
Nucleotide metabolism
Module
smd_M00958
Adenine ribonucleotide degradation, AMP => Urate
smd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Smed_4621
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
Smed_4621
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABR63419
UniProt:
A6UID9
LinkDB
All DBs
Position
pSMED01:1122359..1124692
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AA seq
777 aa
AA seq
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MNVMQPVVRVRGAVHDKERHESGHKHVSGTAEYIDDIPEPAGTLHGYLGLSQRAHAEILS
VNFEAVHDSPGVVGVLTAQDIPGENDISPAHKHDDPVFATGRVEFHGQPIFAVIATSREA
ARRAAAKVKIDYRDLPHVTDVLEAAAANYPLVIDPLKLERGDIDAGFAKAKNIVSGEMRI
GGQDHFYLEGQISFAIPGEDDEVTVFSSTQHPSETQLMVAHVLGVPSNAVTVNVRRMGGG
FGGKETQANLFAAVAAVAARKYRRAVKVRPDRDDDMAATGKRHDFHVDYKIGFDDDGRIE
AVDAVFAARCGFSADLSGPVTDRALFHADNCYFYPNVRLRSRPLKTNTVSNTAFRGFGGP
QGMVGGERMIEDVAYALGKDPLEIRKLNFYGGEGRNLTPYHQTVEDNIIGRIIEELETSS
DYAARRKAIIAFNRENHVIKRGIALTPVKFGISFTKTEYNQAGALIHVYTDGSIQLNHGG
TEMGQGLYTKVAQVVADEFQVDLDHIKVTATSTGKVPNTSATAASSGSDLNGMAAANACQ
QIKERLVRFAAERYGVSQADVAFEPNTVRIGAERIPFADLIKAAYAARVQLSAAGFYKTP
KIHWSRAEGRGRPFYYFAYGASCSEVSVDTLTGEYQVERTDIIHDVGKSLNPALDLGQVE
GAFVQGMGWLTTEELWWDAKGRLRTHAPSTYKIPLASDRPRVFNVHLADWSVNREETIRR
SKAVGEPPFMLGISVLEAISMAAASVADYRIPPRIDAPATPERVLMAVERLRAARAG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatgcagcccgtcgtccgcgtccgcggcgccgtccacgacaaggaacgccac
gaatccggtcacaagcatgtttccggaaccgcagaatatatcgatgacattccggagccc
gcgggtacgcttcacggctatctcgggctctcgcagcgcgctcatgccgaaatcctgtcc
gtgaatttcgaggcggtgcatgacagtcccggtgtcgtgggtgtgctcacggctcaggac
atacccggcgaaaacgatatcagcccggcgcacaaacacgacgatccggtttttgcgacc
ggcagggtcgagttccacggtcagccgatctttgcggtcatcgccacgtcgcgcgaggcc
gcccggcgcgctgccgccaaggtgaagatcgactatcgcgatctgccgcatgtgacggat
gttctcgaagcggcggctgcgaactatccgctggtgatcgatcccctgaagctcgagcgt
ggcgacatcgatgccggctttgccaaagcgaagaacatcgtttcgggcgaaatgcgcata
ggcggtcaggaccacttctacctcgagggccaaatctccttcgccattcccggtgaggat
gacgaagtgaccgtcttctcctcgacccagcatccgagcgagacgcagctcatggtcgcc
catgttcttggcgtgccctcaaatgcggtgaccgtcaatgtccgccgtatgggcggcggc
ttcggcggcaaggagacgcaggcaaatcttttcgcggcggttgcggcagtggcggcaagg
aagtaccgccgtgcggtcaaggtgcggcccgaccgcgacgacgacatggcggcaaccggc
aagcgccacgactttcacgtcgactacaagatcggcttcgacgatgatggccgaatcgag
gcggtggacgcggttttcgccgcacgctgcggcttctcggccgacctttccggaccagtg
acggatcgtgcgctctttcacgccgataattgctatttctacccgaatgtccggctgcgc
tcgcgcccgctcaagaccaacaccgtgtcaaatacagcgtttcgcggtttcggcggaccg
cagggcatggtcggcggagagcggatgatcgaagacgtagcctatgcgctcggcaaggac
ccgctcgaaatccgcaagctcaatttctatggcggcgaagggcgcaacctgacgccgtat
caccagacggtcgaagacaacatcatcgggcggatcatcgaggaactcgaaacctcgtct
gattacgccgcacggcggaaggcgatcatcgccttcaaccgcgagaaccatgtcatcaag
cgcggcatcgcgctgacgccggtcaaattcggcatctccttcaccaagaccgagtacaat
caggcaggcgccctgatccacgtctatacggacgggtccatccagctgaaccatggcggc
accgaaatggggcaggggctctataccaaggtcgcccaggtcgtagcggacgagttccag
gttgatctcgaccatatcaaggtgacggcgacctcgaccggcaaggtgccgaacacctct
gcaacggctgcgtcgtccggttcggacctgaacggcatggccgccgcaaacgcctgccag
cagatcaaggagcggctcgtgcgcttcgcggccgaacgctacggcgtgagccaggccgat
gtcgctttcgagccaaacacggttcgaataggggccgagcgcatcccctttgcggatctt
atcaaggcagcttatgccgcgcgcgtgcagctctcggcggccggcttctacaagactccg
aagatccattggagccgcgccgaagggcggggccggcctttctactatttcgcctacggc
gcctcatgctccgaggtcagcgtcgacacgctgaccggcgaataccaggtcgaacgaacg
gacatcattcacgacgtcggcaagtcgctgaaccctgctctcgacctcggccaggtcgaa
ggtgccttcgtccagggcatgggctggctgacgaccgaggaactctggtgggatgccaag
ggccggctgcggacgcacgcgccatccacctacaagatcccgctcgcgtccgatcgcccg
cgcgtcttcaacgtgcatctggccgattggtcggtgaaccgggaggagacgatccggcgc
tcgaaggcggtcggggaacctcccttcatgctaggcatttcggttctggaggcgatatcc
atggcggcggcaagcgttgcggactatcgtattccgccgcgcatcgatgcacccgcaaca
ccggagcgcgttctgatggctgtcgagcgcctgcgcgccgcccgggccggttag
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