Sinorhizobium medicae: Smed_5138
Help
Entry
Smed_5138 CDS
T00555
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
smd
Sinorhizobium medicae
Pathway
smd00280
Valine, leucine and isoleucine degradation
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Smed_5138
Enzymes [BR:
smd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
Smed_5138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABR63915
UniProt:
A6UJT5
LinkDB
All DBs
Position
pSMED02:91444..92976
Genome browser
AA seq
510 aa
AA seq
DB search
MSNHLFDAIRRASRPDSVFILAADERVWTYGDMLEHSGRLASALVSLGVQPGDRVAVQVE
KSPEALMLYLACLRAGAVYLPLNTAYTLTELDYFFGDAEPRLIVCAPAAKEGISKIAAYR
SAGVETLDDKGGGSLIELALGETPDFSDLDRRADDLAAILYTSGTTGRSKGAMLTHDNLL
SNAVTLRDHWRFTADDRLIHALPIFHTHGLFVASNVILLAGASMFFLPKFDANEVLSLMP
RSTTMMGVPTFYVRLVQNPGLTREVTAGMRLFVSGSAPLLAETHRTFAHMTGHAILERYG
MTETNMNTSNPYDGERIAGTVGFPLPGISLRVADPESGKPLPNGDTGMIEVKGPNVFKGY
WRMPEKTQAEFRADGFFITGDLGKIDDRGYVHIVGRGKDLVISGGYNIYPKEVETEIDQM
PGVVETAVIGVPHPDFGEGVTAVVVRKPGATIDERAILGGLEGRLARYKQPKRVIFVEDL
PRNTMGKVQKNVLREAYADLYAEAGAGARI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcatctgttcgatgccatacgccgggcatcccgccccgactccgtcttcatc
ctggcggctgacgagcgcgtttggacctatggtgacatgctggaacattccggccgcctc
gcctccgcgctcgtctcccttggcgtgcagccgggcgaccgggtggcggtgcaggtggag
aagagtcctgaggcgttgatgctttaccttgcctgccttcgcgcaggcgccgtctatctt
cccctaaacacggcctacacgctgacggagctcgactatttcttcggtgacgccgagccg
cggctcatcgtctgcgcccccgccgccaaggaaggaatctcgaaaattgccgcatatcgc
agcgccggtgtcgagacgctcgatgacaaggggggcggatcgctgatcgagcttgctctt
ggtgaaacgccggatttttcggaccttgaccgccgcgcggatgaccttgccgcaatcctt
tacacttctggcacgaccggacggtccaaaggcgcgatgctgacgcatgacaacctcctg
tcgaatgccgtcacgctccgcgaccactggcgcttcaccgccgacgaccggctgatccat
gcgctgccgatctttcacacgcacggccttttcgtcgcgtccaacgtcattcttctggcc
ggggcttcgatgtttttcctgccgaaattcgacgcgaacgaagtcctgagcctgatgccc
cggtcgacgacgatgatgggtgttccgaccttctacgtccgcctcgtccaaaatccgggg
ttgacgcgcgaggtgacggccgggatgcggcttttcgtgtcgggctcggcgcccctgctt
gccgagactcacaggacgtttgcgcatatgacaggacacgccattctcgagcgatacggc
atgaccgaaaccaatatgaacacctcgaacccgtatgacggggagcgaatcgccggaacg
gtgggctttccgttacccggcatctcccttcgtgtcgccgatccggagagcggcaagcct
ctcccgaacggtgacaccggcatgatcgaggtcaaaggcccgaacgtgttcaagggctat
tggcgcatgccggaaaagacgcaggccgagtttcgcgccgacggttttttcatcaccggc
gatctcggcaagatcgacgaccgcggttacgtccacatcgtggggcgaggcaaggatctc
gtgatttccggtgggtacaatatctatccgaaggaagtcgaaacggagatcgaccagatg
ccgggcgtcgtggaaacggcagtcatcggcgtgccgcacccggatttcggcgaaggcgtc
acggccgtggtcgtccggaagcccggtgcgacgatcgacgagcgcgccatcctcgggggg
ctggaaggccgcctcgcgcgctacaagcagccgaagcgggtgatcttcgtggaggacctg
ccacgcaacacgatgggcaaggttcagaaaaatgtgcttcgcgaagcctatgccgatctt
tatgccgaagcgggagccggcgcgcgcatatag
DBGET
integrated database retrieval system
