KEGG   Sinorhizobium meliloti 2011: SM2011_c01772
Entry
SM2011_c01772     CDS       T02497                                 
Symbol
ribD
Name
(GenBank) putative riboflavin biosynthesis protein (deaminase/reductase)
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smel  Sinorhizobium meliloti 2011
Pathway
smel00740  Riboflavin metabolism
smel01100  Metabolic pathways
smel01110  Biosynthesis of secondary metabolites
smel01240  Biosynthesis of cofactors
smel02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smel00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SM2011_c01772 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SM2011_c01772 (ribD)
Enzymes [BR:smel01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SM2011_c01772 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SM2011_c01772 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AGG73791
LinkDB
Position
1318704..1319909
AA seq 401 aa
MGEPAREDERFMAAALRLARRNLGLTSTNPSVGCIIVNKGTIVGRAVTAPGGRPHAETQA
LAEAGEKARGATAYVALEPCSHHGKTPPCADALIASGVGRVVVSILDPDERVAGRGVVML
RGAGIDVDIGTLHEEGGRVLEAYLMRQRKKRPHVTLKLAVSADGMIGRRGEGQVRISGAV
SRAQVQVLRAETDAILVGIGTAIADDPELTVRMPGLEERSPVRIVLDRRLDLPLESKLVR
TARDVPLIVVTGDAGYPSSHEQGAGARRADEGQSSLPLSSGSTREPVLSPLAEAGTDYDA
RRGALEAAGAELLSADTIPDLLAALASRGISSLLVEGGARAARSFLDADLVDRILLFTGP
AAIGEGGISSPFQRTSVPEGFTLRRTARYGDDIFEDYERDS
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgggcgagccggcacgtgaagacgaacgtttcatggcggcggcgctgcggcttgcaagg
cgcaatctcggcctgacttccaccaatccctcggtcggctgcatcatcgtcaacaagggc
acgatcgtcggccgagccgtgaccgctccgggcgggcgaccgcacgcggaaacgcaggcg
cttgcggaggcgggcgaaaaggcgaggggagcgaccgcctatgtcgccctcgaaccctgc
tcgcatcatggcaagaccccgccctgcgcagatgcgctgatcgcctcgggggtcggccgt
gtcgtcgtttccatcctcgatcccgatgaacgcgttgccggccgcggcgtggtgatgctt
cgcggcgccggcattgacgtcgacataggcacgctccatgaagagggcgggcgtgtgctc
gaggcctacctcatgcgtcagcgcaagaaacgcccgcatgtgactctgaaacttgcggtt
tccgcggacggcatgatcggacggagaggcgaggggcaggtgaggatttccggtgccgtc
tctcgcgcccaggtgcaggtgttgcgtgccgagacggacgcgatcctcgtcggtatcggt
acggccattgccgacgatccggaacttacggtgcggatgccagggctggaggagcgctct
ccggtccggatcgtgctcgaccgccgcctcgatctgccgctcgagtcgaaattggtccgc
actgcgcgcgacgttccgctgatcgtcgtaacgggagacgcgggctatccttcttcccac
gagcagggagcaggtgcccgaagggcggatgaggggcagagcagtttgcccctctcctcg
ggttcgacccgagaaccagtcctctctccgctcgcggaggcagggaccgattacgacgcc
cgtcgaggagccctcgaagctgcgggggccgagctgctgagcgccgataccatcccagac
ctcctggccgcacttgcatcccggggcatctcctccctgctcgtggagggtggggccaga
gcggcgcgttcctttctcgatgcggatctggtggatcgaatcctgcttttcaccggtccg
gcagccattggcgaaggtggtatttcatccccatttcaaaggacgtcggtgccggagggc
ttcacgcttcgccgcacggcgcgctatggcgacgatattttcgaggattacgagagagat
agctga

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