Silurus meridionalis (southern catfish): 124375909
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Entry
124375909 CDS
T08004
Symbol
ptger1c
Name
(RefSeq) prostaglandin E receptor 1c (subtype EP1)
KO
K04258
prostaglandin E receptor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124375909 (ptger1c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124375909 (ptger1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124375909 (ptger1c)
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Lipid
Prostaglandin
124375909 (ptger1c)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
124375909
NCBI-ProteinID:
XP_046690602
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Position
22:3827344..3833487
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AA seq
375 aa
AA seq
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MDFVFSSTISTACQDFNLSFIGQQDRNLTSPSPHNPPNFGLSYFTMSFGILSNLIGLAIV
LASYARFHHRAKTPFLLLAAALLLSDLAGHLVTGALALHLHLGRVRRQRAASREPSEPPQ
AFCKLFGACMVFFGLTPLLLGSAMAVERCMGITQPLQHSAMATTAHVRLSVLLLITMAFT
LAALPLLNIGTYEPQFPGTWCFLPVHGALSSADAGLALAFSSVGLSALTVSVLCNAVSGM
TLLQARFNNQSAKLTASRRRRSSRSPVHSLDVEMMVQLVVITIVSSVCWSPFLIYISMSV
RQFYRGETHSDPHYEQLLLLGLRMASWNQILDPWVYILLRRAVLRRVCSLLRPSRVILTQ
SNSCGSSERQEIHLH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtctttagttccacaatttctacggcgtgtcaagactttaacctgtcgttc
atcggtcaacaggatcgtaacttgacgtctccgtctcctcacaacccaccaaactttggg
ttgtcttacttcaccatgagcttcgggatattgtctaatttaatcggcctggccatcgtg
ttggcgtcgtacgcccgctttcaccaccgagctaagacgccgtttctgctgcttgctgcc
gcgctccttctgagtgacctggcgggtcatttggtcaccggcgctttagccttgcacctg
cacctcggaagagtcaggaggcaacgagctgcaagcagggagccgagtgaaccccctcag
gctttctgtaaactctttggtgcctgcatggtctttttcggcttgactcctctccttttg
ggaagcgccatggccgtggagcgctgcatgggcatcacacaaccgctccagcactctgcc
atggctacaacggctcacgtccgcctcagtgtcctcctgctcatcaccatggcctttact
ctagcggcactgcctttgctcaacataggaacgtatgaacctcagttccctggtacctgg
tgcttccttcctgttcatggcgctctctcgagtgctgatgccggcctggccttggccttc
tcaagcgtgggcctgtcagctttaacagtctctgtactgtgcaatgctgtgagtgggatg
acgttgctgcaagccaggtttaacaaccaaagcgcaaagctgaccgcctccaggagacgc
agatcgtctagatcacctgtgcattcactggatgtggagatgatggtgcagctcgtggtc
ataaccattgtgtcctctgtctgctggagtccctttctcatttacatctccatgtcagtg
agacagttctacagaggcgaaacccactcagacccccattatgagcaactgctgctgctg
ggtttgaggatggcctcctggaaccagatcctggacccatgggtgtacatcctcctgaga
cgggccgtgctgcggagagtgtgcagtctgcttcggcccagcagggtcattttaacccag
agcaactcatgtgggagttcggagcgacaggaaatccatttgcactga
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