Silurus meridionalis (southern catfish): 124377035
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Entry
124377035 CDS
T08004
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124377035 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124377035 (esr1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
124377035 (esr1)
Nuclear receptors [BR:
smeo03310
]
3. Estrogen like
3A. Estrogen receptor
124377035 (esr1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Rhomboid_N
Motif
Other DBs
NCBI-GeneID:
124377035
NCBI-ProteinID:
XP_046692256
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Position
23:complement(23045862..23064927)
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AA seq
629 aa
AA seq
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MSGEQASSEAPAGARHRRRSELEGYSASLASLKLSPMYPEEEQRTTGGMSSSAHYLNGTF
EYTTNPEASNSSADYYPAPADLQVAPEPQDESLQPLTNGSSSPLVFIPSGPQISPFISHS
PVGQHAAQQVPYYLETSGTSNYRSDGSSVLASAGSRVDLCSATGRQDVYSTVGASGPSGA
SGTSGAVGLVKEIRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTI
DRNRRKSCQACRLRKCYEVGMMKGGFRKERGGRIIKHHRRHSGLKRGYGEAKNVSDVREA
PLLDGRGSSGIGIEGRVAGVVYMAPEQVLLLLLRAEPPTLCSRQKHSRPYSELTMMSLLT
NMADRELVHMIAWAKKVPGFQELSLHDQVQLLESSWLDILMIGLIWRSIHSPGKLIFAQD
LILDRSEGECVEGMSEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSSPME
PLRNSFMVQCMIDNITDALIHYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYS
MKCKNKVPLYDLLLEMLDAHRLRPLGKLSRNWADRVSSSPNTTPTTPTSSTTTTTTTTTT
HQHNHHSSISTCPTDLQSNPPHPDQSSSP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagagcaggcttcttctgaagctccggctggtgccaggcatcgacgcaggagc
gagctagaagggtattcggcgtctctcgcttccctcaagctctcccccatgtacccggag
gaggagcagcgcaccacggggggcatgtcctccagcgctcactacctaaacgggaccttc
gagtacaccaccaaccccgaagcctcgaactcgtcagcagattactacccggctcctgcg
gatctacaggtggccccggagcctcaggacgaaagcctgcagcctttgacgaacggctcc
tccagcccactggtcttcattccttcgggtccacagatctctccattcatcagccattct
cctgtgggacagcatgcggctcagcaggtgccctactacctggaaacatcaggaacctcc
aattacaggtcagatgggtccagtgtattagccagtgcaggatcaagagtggatctgtgc
agtgccaccgggaggcaggatgtgtacagcactgtgggagcctcgggaccatcaggggct
tcggggacttcaggagcagtggggttggtgaaggagatccgatattgcgctgtgtgcagc
gactacgcctcaggataccactacggagtctggtcctgcgagggctgcaaggcattcttc
aagcgcagcatacaaggccacaacgactatgtgtgtccagcgacaaaccagtgcaccatc
gaccggaaccgcaggaagagctgtcaagcatgtcgtctgcgcaaatgctatgaagtggga
atgatgaaaggagggttccgtaaggagcgaggcggtcgcatcattaagcaccacagaagg
cacagtggactgaaacgaggttatggcgaagcaaaaaatgtttctgatgtgagggaagca
ccactattggacgggcgaggcagctctgggatcgggatcgaaggcagggtagctggtgtg
gtgtacatggctccggagcaggtgttgctgctgctgttgagggcagaaccgcccaccctt
tgctcgcgacagaaacacagccgcccctacagcgagctcaccatgatgagtctcctcacc
aacatggccgacagggagctcgttcacatgatcgcctgggccaagaaagtgcctggattc
caggaactctctctgcatgatcaggtgcagctgttggaaagttcctggctggatattttg
atgattggcctcatttggaggtccatccactcacctggaaaactcatcttcgcacaggac
ctcatactcgacaggagtgagggcgagtgtgtggagggcatgagtgaaatatttgatatg
ttgctcgccaccgtggctcgtttccgcaccctgaaactcaagtcagaggagtttgtgtgc
ctcaaagccatcattctgctcaactctggtgcattttcattctgctcctcccccatggag
cccctgaggaacagcttcatggtgcagtgtatgattgataacattacggacgctctcata
cactacatcagccaatcaggaatctcggtgcagctccagtccaggcgtcaggcccagctc
ctgcttttgctctcgcacatcagacacatgagctataaagggatggagcacctgtacagc
atgaagtgcaagaacaaagtgcctctgtacgatctgctgctggagatgctggatgcacat
aggctccgcccactgggcaaattgtcaaggaactgggctgatagagtgtcgtcttcaccc
aatacaacccccacaaccccgacctcctccaccactaccaccaccaccaccaccaccacc
catcaacacaaccaccacagcagcatctccacgtgtcctacagatttacagtccaaccca
ccgcaccctgaccaaagctccagcccctaa
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