Silurus meridionalis (southern catfish): 124379026
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Entry
124379026 CDS
T08004
Symbol
ppp2r1ba
Name
(RefSeq) protein phosphatase 2, regulatory subunit A, beta a isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04350
TGF-beta signaling pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124379026 (ppp2r1ba)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124379026 (ppp2r1ba)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124379026 (ppp2r1ba)
04114 Oocyte meiosis
124379026 (ppp2r1ba)
09144 Cellular community - eukaryotes
04530 Tight junction
124379026 (ppp2r1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124379026 (ppp2r1ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124379026 (ppp2r1ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124379026 (ppp2r1ba)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124379026 (ppp2r1ba)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124379026 (ppp2r1ba)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124379026 (ppp2r1ba)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124379026 (ppp2r1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
Cnd1
HEAT_EZ
SCD
Adaptin_N
CLASP_N
M11L
Motif
Other DBs
NCBI-GeneID:
124379026
NCBI-ProteinID:
XP_046694973
LinkDB
All DBs
Position
25:complement(14369247..14379196)
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISHEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRNLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
EALVMPTLRQAAEDKSWRVRYMVADKFAELQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDSRETIIMNHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLTKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNSLQTEVKPVLEKLAADQDIDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccgacggagatgattctctatatcccattgcggttcttattgacgaatta
cggaatgaagacgttcagttgcggctgaacagcattaagaagctctccaccatcgccttg
gccttgggtgttgagaggacacgcaccgaacttctccctttcctcacagatactatctac
gatgaggatgaagtgctccttgccctcgctgagcagctgggcaacttcaccatgctggtc
ggaggccctgaatatgtgcattgtctccttccacctttggagagtctggccacggtggag
gagaccgtggtgcgggacaaagctgtggaatcattgcggaagatctcccacgagcactcg
cctgtggacctggaggtgcacttcgagcccctggtgaaacgcctggcaagcggcgactgg
ttcacctcacgcacttcagcctgcggactcttcagcgtctgctacccacgggtctccagc
actgtcaaagccgagattcgccagcactttcgtaacctttgctctgatgatacgccgatg
gtccgtcgcgccgctgcgtctaagctgggcgagttcgcaaaagtgttggagttggattac
gtcaagagcgacatcatctctctgttcactgcgctggcttctgacgagcaggactctgtg
cgtctcctggctgtggaggcgtgtgtgagcatcgccacactgttgccccaggaggacctg
gaagctctggtcatgcccacactgcgccaggcggccgaggacaagtcctggagggtgcgc
tatatggtagcggacaagttcgctgagttacaaaaggcagtaggtccagaaatcacaaag
aacgaccttgtgccagccttccagaatcttctcaaagactgtgaagctgaagttcgagct
gctgctgccaataaggtcaaagaattctgtgagaatctcccggaggacagtcgagagacc
atcatcatgaatcatattcttccctgcgtcaaggaactggtttcagacacaaatcagcac
gtcaaatcagccctggcctccgtgatcatgggcttgtcgaccattctgggaaaggacaac
accatcgagcacctgcttcctctctttttggctcagctcaaagatgagtgtccagaggtg
cgtctgaacataatctctaatttggactgcgtgaatgaggtcattgggatccgacagctc
tcccagtctctccttcccgctattgtagagctagcagaagacgccaagtggagggtgcgg
ctggccatcattgaatacatgccactcctggccggccagctgggtgtggagttcttcgac
gagaaactgaattccctgtgcatggcgtggcttgtcgaccatgtatacgccatccgagag
gcagccacctgcaacctgacgaagctggtggagaagtttggtgccgagtgggctcagaac
acaatcgtacccaaagtgctgggaatggccaatgaccccaactacctgcatcgcatgacc
acactcttctgcatcaacgctctgtcggaggcgtgcggccaggagatcaccaccaagcac
atgctccccgtcgtcctgaaaatgtctaacgatcaggtggctaacgtgcgcttcaacgtg
gccaagtctctgcagaagatcggccctgttctcgacagcaactctctgcagaccgaggta
aagcctgtgctcgagaaattggctgcagaccaagatatcgacgtcaaatactttgcccaa
gaggccataagtgttcttgccctggcctaa
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