Silurus meridionalis (southern catfish): 124379903
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Entry
124379903 CDS
T08004
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124379903 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124379903 (mmp2)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
124379903 (mmp2)
Peptidases and inhibitors [BR:
smeo01002
]
Metallo peptidases
Family M10
124379903 (mmp2)
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GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
124379903
NCBI-ProteinID:
XP_046696488
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All DBs
Position
26:complement(8358545..8378447)
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AA seq
657 aa
AA seq
DB search
MGFFVPFSRRHLVLRVLLVQIVASLGTFAAPSPIIKFPGDDPVTRTDKEVALHYLNKFYG
CPQDRCNLMVLKDSLKKMQKFFSLPETGEIDQNTVEIMKKPRCGVPDVANYNFFPAKPKW
QNNEITYRILGHSPDMDEETIDDAFFRAFKVWSDVTPLKFKRVMSGDADININFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEHWTLGDGQVVKVKFGNAEGEFCKFPFLF
MGKIYNSCTNQGRDDGFLWCSTTYDFDKDGKYGFCPHELLLTLGGNGEGSPCKFPFTFQG
EKYDSCTTAGRDDGYRWCATTENYDQDKTYGFCPETALSTIGGNAEGAPCVFPFVFLGQT
YDVCTTSGRNDGKSWCSVTKSFDEDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKHFRLSNDDIRGIQDLYGAPTGKPLPPTQGPVTPMDICSENIVFDAIAQFR
GETFFFTDRFLFRTTNIEKKPSGPLLVATFWSEIPEKIDAAYENPLEEKSIFFSGDEMWV
YSASNLERGYPKKISSMGFPPDVSRIDAAYAFHKSKKTYLFSGDKFWRYNEAKMKMDPGF
PKLIADSWNGVPDDLDAAFSINGGGYSYFFKGSHYHKMDENFRIVKVGEVKTDWLHC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctttgtgcctttcagtcggaggcatttagtccttcgagttctcctggttcag
attgttgcttctttaggaacttttgcagcgccttcgcctattattaagttcccaggcgat
gatcctgtaacccggacagacaaagaagtagcgctgcattatttgaataagttctatgga
tgcccacaagaccgctgcaacttgatggttctgaaggactcgctaaaaaaaatgcagaag
ttcttttctcttccggagactggagagattgaccagaatacagttgagattatgaagaag
ccacgctgtggagtcccagatgtggccaattacaacttcttcccagcaaaacctaagtgg
caaaataatgaaattacatacaggattttaggtcacagtccagatatggatgaggagaca
attgatgatgcattctttcgtgcttttaaagtctggagtgatgttacacctcttaaattc
aagcgggtcatgtccggagatgctgatatcaatatcaacttcgggcgcaatgagcatggc
gacggttatccattcgatggtaaggatggtctcctggcccacgcttttgctccaggtcct
ggaattggaggcgattctcactttgacgatgatgagcattggactttgggagatgggcaa
gttgtaaaggtgaagtttggcaacgccgagggggagttctgtaagtttccgtttctcttc
atgggtaaaatatacaacagttgcacaaatcaagggcgtgatgatggctttctgtggtgt
tcgacaacctatgactttgacaaggatggaaagtatggcttctgtccacatgaattgctt
ctcacactgggtggaaatggagaagggtcaccatgtaagtttcccttcaccttccaagga
gaaaagtatgacagctgtaccactgcaggcagagacgatgggtaccgctggtgtgccact
actgagaactacgaccaggacaagacctatgggttctgccctgaaactgccctgtctaca
attggagggaatgctgagggagctccctgtgtgttcccctttgttttcctgggccaaacc
tatgatgtgtgcaccacctctgggcgtaatgatgggaagtcgtggtgcagtgtcaccaag
agttttgacgaagaccgaaaatggggtttttgtccagaccaaggttacagtctgttcttg
gtggcagctcatgagtttggccatgctttgggcctggagcactcccaagatcctggagca
ctcatggcgcccatctacacctacactaagcacttcaggctctccaacgatgacatcaga
ggaattcaggacctctacggagcaccaacaggaaagccacttcctcccactcagggtcca
gtcactcctatggatatctgcagtgagaacattgtatttgatgctatagcacagttcaga
ggggagactttcttctttacagataggttcctgtttagaactactaatatagagaagaag
ccatcaggtccactgttggtggccacattctggagtgagattcctgagaagatagatgca
gcctatgagaatccactggaggagaagtctattttcttttcaggtgatgaaatgtgggtg
tattcagcgagcaatctggagagaggttatcccaaaaagatctcctccatgggatttcca
ccagacgtcagccgcatagatgcggcctatgccttccacaagagcaagaaaacctacctg
ttctctggagacaaattctggagatacaatgaggccaagatgaaaatggatcctggcttc
cccaaactcattgccgattcctggaacggagtccctgatgatttggatgctgccttcagt
attaacggagggggctacagctacttcttcaaaggctcccactatcacaaaatggatgag
aactttaggatcgtcaaagtaggagaggtgaaaacagactggctgcactgctaa
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