Silurus meridionalis (southern catfish): 124380939
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Entry
124380939 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124380939
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124380939
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124380939
NCBI-ProteinID:
XP_046698230
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Position
27:17772192..17784079
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AA seq
602 aa
AA seq
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MHHHELGLSASPGPVILQTESRDRWGKKGDFLLSVIGFAVDLGNVWRFPYICYQNGGGAF
LIPYTLMAIFGGVPLFYMELALGQYHRTGAISIWKHICPIFKGIGFSICVIALYVSFYYN
TIIAWALFYFYSSFSSTLPWTNCDNAWNTENCTNYFGKDNVTWTNYSRSPAEEFYTRNVL
ELHESDGLENVGVIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLFILLI
RGATLPGAWRGVVFYLQPKWEKLKDTTVWVDAAAQIFFXLGPGFGVLLALSSYNPFNNNC
YRDAIVTSLVNCLTSFMSGFVIFTVLGYMAEQRHVNVEDVARNKGPSLLFITYPEAIANM
MGSTFFAIIFFAMMITLGLDSTFGGLEAIITAVMDEYPDFLSHRREVLVLGLVAICFLGS
LSTLTKGGAYVVKLLEEYGVGSSIIAIVFLEATAVSWFYGINRFSNDVKAMLGHMPGLFW
RFCWVAISPTFLAYIIISSLLNPAPLVMFDYTFPDWSVTVGYIIGASSFIWIPVYMVYKL
VWTPGSLKQRLAVCLRPERTLPDIHTDTLGLTPIRLDLCDPPKAHLTNWGQDSLQEIIEK
LP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatcacgagttggggttgagcgcgagcccgggtccggtcatccttcagacggag
tcgcgcgaccgatggggcaaaaaaggcgactttctgctctcggtgattggattcgctgtg
gatttgggcaacgtttggagatttccctacatctgctaccagaacggcggaggagccttc
ctcatcccctataccctcatggctatattcgggggtgtaccactcttctacatggagctg
gctctggggcagtaccaccgcacaggcgccatctccatatggaaacacatttgccccata
ttcaaaggcatcggtttctccatctgcgtcatcgcgctgtacgtctcgttctactacaac
accatcatcgcgtgggccttgttctacttctactcatccttcagcagcactctgccctgg
acgaactgcgacaacgcgtggaacacggaaaactgcaccaactacttcggcaaggacaac
gtgacgtggacaaactactcgcgctcaccggccgaggagttttacacgaggaacgtgttg
gagctccacgagtccgacggtttggagaacgtgggtgtgatccgctggcagctgatgctc
tgcctgttcctcatcttcaccatcgtctactttagcctgtggaaaggagtcaaaacatcg
ggcaaggtggtttgggtcacagccactcttccctacgtggtgttgttcattttgctaatt
cgaggtgcaacgctacctggagcctggaggggcgtcgtcttctacctgcagcccaaatgg
gagaaactaaaggatacaactgtttgggtggatgccgcagctcagatcttcttcnntctc
ggccctggttttggagttctgcttgctctttccagttacaatccgttcaataacaactgc
tacagagacgccattgtgacgagtttggtgaactgcctgaccagcttcatgtctggcttt
gtgatttttaccgttctgggctacatggctgagcagagacacgttaacgtggaagatgta
gccagaaataagggcccgagtcttctgttcatcacttacccagaagccattgccaacatg
atgggatccacgtttttcgccattatcttctttgcgatgatgatcacactgggattggac
agcacgtttggaggtctggaagccatcattactgctgtcatggatgagtatccagacttt
ctatcccacaggagggaggtgcttgtgttgggtttggtggccatctgctttttgggttct
ctgagcactcttactaaaggaggtgcgtatgtagttaaactacttgaggagtatggagtc
ggatcctccattatagctattgtgtttttggaagccaccgcagtctcctggttttacggg
atcaacaggttcagtaacgatgtcaaagccatgcttgggcacatgcccggactcttctgg
agattttgttgggtagccatcagcccgacttttctagcgtacatcatcatcagctctctg
ctgaacccggccccgcttgtgatgttcgattacacctttcctgactggagcgtcacggtg
ggttacataatcggagcctcgtctttcatttggatcccggtctacatggtgtataagctg
gtgtggacgcccggctcgcttaagcagcgtctggctgtttgtctgcgacccgaacgaacg
ctgccggacatccacacagacacgctgggtttgactccgatcaggctggacctctgtgat
cctccgaaagctcatctaacaaactggggtcaggattcacttcaggaaatcattgagaaa
ttaccgtga
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