KEGG   Silurus meridionalis (southern catfish): 124381523
Entry
124381523         CDS       T08004                                 
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo00052  Galactose metabolism
smeo00510  N-Glycan biosynthesis
smeo00513  Various types of N-glycan biosynthesis
smeo00514  Other types of O-glycan biosynthesis
smeo00515  Mannose type O-glycan biosynthesis
smeo00533  Glycosaminoglycan biosynthesis - keratan sulfate
smeo00601  Glycosphingolipid biosynthesis - lacto and neolacto series
smeo01100  Metabolic pathways
Module
smeo_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
smeo_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    124381523
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    124381523
   00513 Various types of N-glycan biosynthesis
    124381523
   00515 Mannose type O-glycan biosynthesis
    124381523
   00514 Other types of O-glycan biosynthesis
    124381523
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    124381523
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    124381523
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:smeo01003]
    124381523
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124381523
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124381523
Enzymes [BR:smeo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     124381523
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     124381523
    2.4.1.90  N-acetyllactosamine synthase
     124381523
Glycosyltransferases [BR:smeo01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   124381523
Membrane trafficking [BR:smeo04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    124381523
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   124381523
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 124381523
NCBI-ProteinID: XP_046699197
LinkDB
Position
28:952749..979696
AA seq 389 aa
MEERFCNFKVLWRMFIVVMAVGLVFLILICYGSFDLSMNFMKSERKQQQQQHMITPALEK
HSLSSNLSDVPFATEVITEIVTNQSLEICPENPPQLKGPLHVEFSSVVKLDKLIEEGSVS
PGGRFRPKECVSQQKVAIIIPFRDRELHLKYWLYYMHPILQRQQLDYGVYVIEQTGADLF
NRAKLFNVGYAEALKEDNYDCFVFSDIDIIPIDDRNLYKCYDQPRHLSVAIDKFNFQLPY
PQIFGGISALSKEQLLKINGFSNNYWGWGXEDDIYKRLSFRGMSISRPDLMIGRCKMIQH
ERDKLNPPNPQRMTQLSHTIEMMDKDGINSLSYSVVSSEKSSLYTRISVNIGSPPALQTS
STSCSSRSIENRGRSLEAEAQRRHCYPPA
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggagcgattctgtaatttcaaggtgttatggcgcatgtttattgtggtgatggca
gtgggactcgtctttctgatccttatctgctacgggagcttcgatttgtctatgaatttc
atgaagtcggagaggaagcagcagcagcagcagcacatgatcacccctgccctggagaag
cactcgctcagcagcaacctatcagatgttccattcgctacagaagtgatcactgagatc
gtcacaaatcaaagtctggagatctgtcctgagaatcctcctcaattaaagggtccttta
catgtcgaattctccagtgtggtgaagttggacaaattgatcgaggaaggcagtgtatct
ccaggaggacgtttcaggccgaaggagtgtgtgtctcagcagaaggttgccatcatcatc
cccttcagagacagagagctgcatctcaaatactggctctattatatgcaccccatccta
cagagacaacagcttgactacggagtctacgtcatcgagcagaccggtgctgacctattt
aatcgagcgaagctgttcaacgtgggctacgccgaggctctgaaggaggacaactacgac
tgttttgtctttagtgacatcgatatcatccctatagacgaccgaaacctctacaagtgt
tacgatcagccgagacacctctccgtggcgattgacaaattcaacttccagctgccatat
ccacagatttttggtggcatttctgcactgagtaaggaacagttactgaagatcaatggc
ttctcaaataactactggggatgggggnntgaggacgacatctacaaacgattatcgttt
cggggaatgtctatctcccgacctgatctcatgatcggcaggtgtaagatgattcaacat
gagagagacaaactaaacccacccaatcctcagaggatgacacagctttcccacacgata
gagatgatggataaggatggaatcaactcgctcagctacagtgtggtgagctcggagaag
agcagtctgtacaccaggatctcagtgaacattggaagtcctccagctctccaaacctcc
agcacatcctgtagttcgcggagcattgagaaccgtggcagaagtttggaggcagaagct
cagagaaggcactgttatcccccggcttaa

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