Silurus meridionalis (southern catfish): 124383392
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Entry
124383392 CDS
T08004
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
smeo03260
Virion - Human immunodeficiency virus
smeo04020
Calcium signaling pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04144
Endocytosis
smeo04672
Intestinal immune network for IgA production
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124383392 (cxcr4b)
03260 Virion - Human immunodeficiency virus
124383392 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124383392 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124383392 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124383392 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124383392 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124383392 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124383392 (cxcr4b)
04050 Cytokine receptors [BR:
smeo04050
]
124383392 (cxcr4b)
04090 CD molecules [BR:
smeo04090
]
124383392 (cxcr4b)
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Chemokine
CXC Chemokine
124383392 (cxcr4b)
Cytokine receptors [BR:
smeo04050
]
Chemokine receptors
CXC Chemokine
124383392 (cxcr4b)
CD molecules [BR:
smeo04090
]
Proteins
124383392 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
COX2_TM
Motif
Other DBs
NCBI-GeneID:
124383392
NCBI-ProteinID:
XP_046701952
LinkDB
All DBs
Position
3:complement(836137..838045)
Genome browser
AA seq
356 aa
AA seq
DB search
MAYFETIIFDYDGNSSEGSGSMDPEGLEEICDQSQDFQKVFLPVVYGIIFILGIVGNGLV
VVVMGFQKKTKNLTDKYRLHLSVADLLFVLTLPFWAVDAVSSWYFGKFMCVAVNMIYTVN
LYSSVLILAFISLDRYLAVVRATNSQATRKLLADRVIYVGVWLPAMLLTVPDLVFTKVQN
NGVRDMCDRIYPHEANTVWKAVFHFQHILVGFVLPGLVILICYCIIISKLSKGSKGQALK
RKALKTTIILVLCFFICWLPYCAGILVDTLVNLKLVSAGCYLEKGLNKWILVTEALAYFH
CCLNPILYAFLGVRFSKSARSTLSITSRSSQKFLTKKRGHMPSVSTESESSSVLSS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcttacttcgaaaccatcatttttgactatgatggtaacagctctgaaggatccggg
agcatggatcctgaaggtctggaggagatctgtgatcaaagccaggacttccaaaaagtt
ttcctgcccgttgtttacgggatcatcttcattttaggaattgtgggaaatggactggtg
gtggtggtgatgggattccagaagaagaccaaaaacctgacggataaatacaggctgcat
ctatcggtggctgatctgctgttcgtgttgacgctgccgttctgggctgtggacgccgtg
agctcgtggtacttcgggaagttcatgtgcgtcgcagtgaacatgatttacaccgtgaac
ttgtacagcagtgtcctcatcctggccttcatcagcctggatcgatatctggccgtcgta
cgagctacaaacagccaggcaacgagaaagctcctggctgaccgcgtgatctacgtaggg
gtctggcttccagccatgctcctcaccgttcctgatctggtcttcactaaagtccagaac
aacggagtcagagacatgtgtgatcggatctaccctcacgaagccaacacggtgtggaag
gcagtgttccatttccagcacatcctggtcggcttcgtgttgcccggtttggtcatcttg
atctgctactgcatcatcatctccaaactgtccaaaggctccaagggtcaagcgctgaag
aggaaagcgctgaagaccaccatcatcctggtgctctgcttcttcatctgctggctgccc
tactgtgccggcatcctggtagacacgctggtcaatctcaaactggtgtcagccggatgc
tacctggagaaaggtctgaacaagtggatcctggttaccgaggctctggcgtacttccac
tgctgcctcaaccccatcctctacgccttcctgggagtgcgcttcagcaaatctgcacgg
agcaccctgagcatcaccagcaggtccagtcagaagtttctcaccaagaaacgaggacac
atgccctcagtatccactgagtcagagtcgtccagcgtgctctccagttag
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