Silurus meridionalis (southern catfish): 124385078
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Entry
124385078 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: carcinoembryonic antigen-related cell adhesion molecule 5-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124385078
04147 Exosome [BR:
smeo04147
]
124385078
04090 CD molecules [BR:
smeo04090
]
124385078
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124385078
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124385078
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124385078
Exosomal proteins of bladder cancer cells
124385078
CD molecules [BR:
smeo04090
]
Proteins
124385078
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Antigens
124385078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_5
Ig_4
C2-set_2
Receptor_2B4
Podoplanin
DUF4690
C1-set
Ig_C17orf99
Coatomer_WDAD
DUF308
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
124385078
NCBI-ProteinID:
XP_046704146
LinkDB
All DBs
Position
4:12707613..12735468
Genome browser
AA seq
835 aa
AA seq
DB search
MDLHAVCCILLLLTCTAVSFGQSLSLPEKIEKQVKENLIIIPFSIPAPTYLLIKWQFNGS
NILYTTASGIEIQPPYTDRTSLDTTTLALTLRSLTESDSGLYALTVETPSGSFTGVTTVQ
VFAPMPVANVTILPSQTKLVEFNSTVSLRCSASGSFLTFVWLNRSSEVTAGDXVQLTDSN
SSLTITHVTRGDRGPYQCKVSNTVSQATSPSMNLTIHYGSENVAVKSDPFEPIYSTGSNI
ILTCSAESSPAAEFQWAVNGSALGQMGHKLTMNNIQSSQSGNYTCIAHNTKTLRYSTSQP
ISITVLETVGGGESLSAGAVSGIVIGVLLGVAVISGLIFYFTKAKKMLRKISKENTQNTD
GPGNVADKANPVGPIYRAGSNIILTCSAESSPTAEFQWAVNGAALGQIGHELKMNNIQSS
QSGNYTCIAHNTKTLRYSTSQPISITVLGVSFGQQLLLPERMDIKVGENLVITPISIPDS
SRLSAKWYYNGTLFLTETPSEIIIQPPYTDRASLNTNTLALTLKRLTESDSGQYTLEVVA
VTETITSVTSVQVFVPTSNVTILPSQTELVEFNSTVSLRCSASGSFPTFVWLNRSSEVTA
DDRVQLTDSNSSLTITNVTRGDRGPYQCTVSNSVSQATSPSMSLSIYYGPENVAVKADPV
GLIYRAGSNIILTCSAESNPAAEFQWAVNGAALSQIGHKLTMNNIQSSQSGNYTCIAHNT
KTLRYSTSQPISITVLAAGGAESLSAGAITGIVIGVLLGVAGISGLIFYFTKAKKLPRTI
SKGNTQNTATVSEYEQDEYYVNFPNNQSGVHTGGSQPDGERQYETALYEQTSVHG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggatttacatgctgtgtgctgcattctgcttctgctgacatgtacagctgtatccttt
ggccaaagtctgtcattaccagagaagatagagaaacaagttaaggagaatctaataatt
atcccattcagtattcctgctcctacatatcttttaataaaatggcaatttaatgggagc
aacatcctttatacgactgcttctggaattgaaatacagccaccgtacacagacagaacc
agtctggacaccaccactttagctctgacactcaggagcctgactgagagtgattctggc
ctgtatgctctgactgtagaaactccttcaggaagtttcacaggtgtaaccacagtgcag
gtgttcgccccaatgccagttgccaatgttaccatattaccaagtcaaacaaaactggtc
gaattcaacagcactgtgagtctcaggtgctctgcgtctggctcctttcttacatttgtg
tggctgaacagaagctctgaggtaacagcaggggattgagttcagttaacagacagcaac
agcagtctgaccatcacccatgtgaccagaggtgacagaggtccataccaatgtaaagtg
tccaacactgtcagccaagcgacaagtccttcaatgaacctcactattcattatggttca
gaaaatgttgctgtgaaatcagatccatttgaacccatctacagcactggatctaacatc
atactgacctgctcagctgagtccagccctgctgctgagtttcagtgggctgtgaatgga
tcagcacttggtcaaatgggacacaagctcacaatgaacaacattcagagcagtcagagt
ggcaattatacctgcattgcccataacacaaagaccctgagatattccacttctcaaccc
atcagcatcactgtactagagacagttggaggtggagagtcactgtctgcaggagctgta
tctggcattgttattggggttttattaggtgttgctgtaatttctggtttgattttctac
ttcacaaaagcaaaaaaaatgctaagaaaaatctctaaagaaaatacacagaataccgat
ggtccaggaaatgttgctgacaaagcaaatccagtgggacccatttacagagctgggtct
aacatcatactgacctgctcagctgagtccagccctactgctgagtttcagtgggctgtg
aatggagcagcacttggtcaaataggacatgagctcaaaatgaacaacattcagagcagt
cagagtggcaattatacctgcatcgcccataacacaaagaccctgagatattccacttct
caacctatcagcatcactgtactgggagtatcctttggccagcagctgttattacctgag
aggatggatataaaagttggggagaacctggtgattaccccaatcagcattcctgattcc
tcacgtctttctgccaaatggtactataacggaactctatttcttactgaaactccctca
gaaattataatacagccaccgtacactgacagagccagtctgaacaccaacactttagct
ctgactctcaaaagactgactgagagtgattctggacaatatactctggaagtagtcgct
gttacagaaactattacaagcgtgacatcggtgcaggtgtttgtgccaacatccaatgtt
accatattaccaagtcaaacagaactggttgaattcaacagcactgtgagtctcaggtgc
tctgcgtctggctcctttcctacatttgtgtggctgaacagaagctctgaggtaacagca
gatgatcgagttcagttaacagacagcaacagcagtctgaccatcaccaatgtgaccaga
ggtgacagaggtccataccaatgtacagtgtccaactctgtcagccaagcaacaagtcct
tcaatgagcctctctatttactatggtccagaaaatgttgctgtcaaagcagatccagtg
ggactcatttacagagctgggtctaacatcatactgacctgctcagctgagtccaaccct
gctgctgagtttcagtgggctgtgaatggagcagcacttagtcaaataggacacaagctc
acaatgaacaacattcagagcagtcagagtggcaattatacctgcatcgcccataacaca
aagaccctgagatattccacttctcaacctatcagcatcactgtactggcagctggaggt
gcagagtcactgtctgcaggagctataactgggattgttatcggggttttattaggtgtt
gctggaatttctggtttgattttctacttcacaaaagcaaagaaattgccaagaacaatc
tctaaaggaaatacacagaatacagctacagttagtgaatatgaacaggatgagtactat
gtcaattttccaaataatcagagtggagttcatacaggaggatctcagcctgatggggaa
agacaatatgaaactgccttgtatgagcagacatctgtccatggttag
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