Silurus meridionalis (southern catfish): 124385859
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Entry
124385859 CDS
T08004
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03020
RNA polymerase
smeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124385859 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
124385859 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124385859 (polr2c)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124385859 (polr2c)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124385859 (polr2c)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124385859 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
124385859
NCBI-ProteinID:
XP_046705236
LinkDB
All DBs
Position
5:complement(24016893..24022967)
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPRPEEWPKSEYSELEEEEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgccaaccagccaacagtaaaaatcacagagctgacggacgaaaatgtgaag
tttgtgatcgagaacacggacttggcggttgcgaactccatcaggcgagtgtttatgtct
gaggtaccaaccattgcaatcgactgggttcagatcgacgccaattcatcggttctccac
gatgagttcattgcacacagagtgggactcattccactgaccagcgatgacatcgtggac
aaaatgcagtactccagggactgcacgtgcgacgatttctgtccagaatgctcagtggaa
ctcaccctggacgtgagatgcaccgaagaccagacgcgtcacgtgacatcgcgggacctg
ctctctaataaccccagagttattcctgtaacctcaagaagtcgagataacgaccctaat
gactacgtagagcaggatgacatcctgctggtgaagctacgaaagggtcaggagctccgt
ctccgagcgtatgccaagaagggcttcggcaaggaacacgccaagtggaacccaacagca
ggggtggcctttgagtacgacccagacaatgctctgagacacacggtgtacccccgtcct
gaggaatggccgaagagcgagtactctgagcttgaggaggaggaagtccaagctccatat
gaccccaatggcaaaccagagaggttttactataatgtggagtcgtgcggttctctccgg
cccgagacgatcgtgatgtctgctctggctgtgctcaagaagaagctgagcgacctacag
acgcagctgagccacgagatccagagcgacgtcctcaccatcaattag
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