Silurus meridionalis (southern catfish): 124387628
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Entry
124387628 CDS
T08004
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00250
Alanine, aspartate and glutamate metabolism
smeo00410
beta-Alanine metabolism
smeo00430
Taurine and hypotaurine metabolism
smeo00650
Butanoate metabolism
smeo01100
Metabolic pathways
Module
smeo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
124387628 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
124387628 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
124387628 (gad1b)
00430 Taurine and hypotaurine metabolism
124387628 (gad1b)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
124387628 (gad1b)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
124387628
NCBI-ProteinID:
XP_046708021
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Position
1:complement(31426565..31466048)
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AA seq
594 aa
AA seq
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MMMAASASSSSSSSAVEVDQSSANLRPPASACDGWYGVAHGCTRKLGMKICGFLQKNNSL
EEKGRMMESFREKEQSHNMENREKETRFSRTETDFSNLFARDLLPAKNGEEPTMQFLLEV
MEILTNYVRKTFDRSTKVLDFHHPHQLLEGIEGFNLELCDQPESLEQILVDCRDTLKYGV
RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIVGWT
NGEGDGLFSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLILFTSEHSHYSIAKAGAA
LGFGKENVILLSTDERGRVIPADLEAKVISAKQKGYVPLFVNATAGTTVYGAFDPINDIA
DICEKYNMWLHVDGAWGGSLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAILVRE
KGILQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEQHV
DRCLEISDYLYNKIKNREGYQMVFQGEPQHTNVCFWYIPPSLRNMPDGEERRERLHKVAP
KIKAMMMECGTTMVGYQPQGDKVNFFRMVISNHAATKSDIDFLIEEIERLGQEL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggcttcggcttcatcctcctcctcatcctcagccgtcgaagtggatcag
agctctgctaatctgcgacctccagcctcggcgtgtgatggttggtatggagtcgcgcat
ggctgcacccgcaaactgggcatgaagatctgcgggtttcttcagaagaacaacagcttg
gaggagaaaggaaggatgatggaatccttcagagagaaagagcaaagtcataacatggag
aaccgggagaaggaaacacgcttcagccgcaccgagactgacttctccaacctgtttgct
cgagatttacttcctgctaaaaatggagaagaaccaactatgcagtttctcctcgaggtc
atggagattctaaccaattacgttcgcaagacgtttgacagatccaccaaagtcctggac
ttccaccatccacatcagctgctggagggcattgagggcttcaacctggagctctgcgac
cagcccgagtcgctcgagcagatcctcgtggactgcagggacacactcaagtacggagtc
cgcacaggtcacccaagatttttcaatcagctctccacagggctggacatcatcggcctg
gctggagaatggttaacctctactgctaacaccaacatgttcacctacgagattgcacct
gtgtttgtgttgatggagcaactgacactgaagaagatgagggagattgttggctggacg
aacggagaaggagacggacttttctcgccgggtggtgccatatcaaacatgtacagcgtg
atgatcgcccggtataagtatttccctgaggtcaaaaccaagggcatgtcggctgcacca
cgcctcatcctcttcacatcagagcatagtcactattcgattgccaaagctggagcagct
cttggttttggtaaagaaaacgtcatcctgctcagcacagacgaaaggggtcgagtcata
cctgcagaccttgaggcgaaagtcatcagcgccaaacagaagggttacgttcctctgttt
gtgaacgcaacagccggcactacagtgtacggagcgtttgaccccatcaacgacatcgca
gacatctgcgagaaatacaacatgtggcttcatgtggatggtgcatggggtggcagtctg
ctgatgtcaaggaagcatcgtcacaagctgaatggcgtggaaagagcgaactcagtcacg
tggaacccacacaagatgatgggcgtgccactgcagtgctcagccatcctggttagagag
aagggaattctgcagggctgtaactccatgtgtgccggatacctgttccagcctgataaa
cagtacgatgtgacgtatgatacgggagataaagccatccagtgtggcagacacgtggac
atttttaaattctggctcatgtggaaggcaaagggcacagttgggtttgagcagcatgtg
gaccggtgtctggagatctctgactatctctataacaaaatcaagaatcgcgagggttac
cagatggtcttccaaggagagcctcagcacactaacgtgtgtttctggtacattccaccg
agtttgaggaacatgccagacggagaagaaagaagggaacgactgcacaaggtggcacca
aagatcaaggcgatgatgatggagtgtggcactaccatggtgggctaccagccccagggt
gacaaagtcaacttctttcgcatggtcatctccaatcacgctgccaccaagtcagatatc
gatttcctcattgaggagatcgagagactcggacaggagctgtga
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