Silurus meridionalis (southern catfish): 124389608
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Entry
124389608 CDS
T08004
Symbol
dnmt3ab
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00270
Cysteine and methionine metabolism
smeo01100
Metabolic pathways
smeo04148
Efferocytosis
Module
smeo_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
124389608 (dnmt3ab)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124389608 (dnmt3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124389608 (dnmt3ab)
03032 DNA replication proteins [BR:
smeo03032
]
124389608 (dnmt3ab)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124389608 (dnmt3ab)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
124389608 (dnmt3ab)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124389608 (dnmt3ab)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
124389608 (dnmt3ab)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124389608 (dnmt3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_DNMT3
ADDz_Dnmt3b
DNA_methylase
PWWP
GIDE
Motif
Other DBs
NCBI-GeneID:
124389608
NCBI-ProteinID:
XP_046710948
LinkDB
All DBs
Position
8:complement(12382934..12434069)
Genome browser
AA seq
983 aa
AA seq
DB search
MPSNTVTTTTTTTNTTTAPFKSSDFNGGGNRMTDSVSREMELAVADRPAFSTPARKVGRP
SRKRRDFLVESCGSLTELVGVSKNHRGTGIQSCSQIQVHNGDVIERHGNRSSEGSRPAQE
QNALENGLPRQAARSTSPSPENGFAVAQDKCDSEKDREENLTLLPRRKRGRRKLERPTKY
VEHREDEIGDSSKNEGARGSPRGGVGWEISLRQRPMPRVTFQAGDPYYISKRTREELLAK
WKMEAEKKAKVVSIMNSIEEYGEIVAKPQTACGTISPLITAPPPPPPTPPPIQQQHQLTQ
ALPKAQPQPQMQPLPQQQPPAQQQQPTDPASPTVATTPEPVPIGDGDKTSPKSADTEAEY
EDGRGFGIGELVWGKLRGFSWWPGRIISWCMTDKSRAAEGTRWVKWFGDCKFSVICVEKL
LPLSSFCTAFHQPTYNKQPMYKKAIYEVLQVASSRAGKVFLSGPESDDTDTSKSVDMQNK
QMIEWAMKGFQPTGPKGLEPPEEERNTYKEVYPETWVEPEAAYAPPPAKRPRKSTSTEKP
KVKDIIDERTRERLVYEVRQKCRNIEDICISCGTLNVSLGHPLFCGGMCQSCKNCFLECA
YQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYM
CGQKHQFGLLERRSDWPNRLQHFFANNHDQDFEPPKLYPSVLAEKRKPIRVLSLFDGIAT
GLLVLKELGIQVDRYVASEICEDSISVGIGRIMYVGDVRNVTRKHIQEWGPFDLVIGGSP
CNELSIVNPARKGLYEGTGRLFFEFYRLLHEARPKEGDDRPFFWLFENVVAMGVSDKRDI
SRFLECNPVMIDAKEVSAAHRARYFWGNLPGMNRPLTAMCSDKLDLQGCLEHGRTAKFDK
VRTITTRANSIKQGKDQHLPVYMNDREDMLWCTEMERLFGFPVHYTDVSNMSRLARQRLL
GRSWSVPVIRHLFAPLKEYFACV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaacacggtcaccaccaccaccaccaccaccaacaccaccacggctcctttt
aaaagctctgacttcaacggtgggggaaatcgcatgactgacagtgtgagccgggagatg
gagctggctgtggcggacaggccagcgttcagcactccggcccgcaaagtcggacggccc
agccgcaaacgcagagacttccttgtggaaagttgtggatcgctaacagagctggtgggt
gtgtccaagaatcacagagggacaggaatccagtcgtgttcgcagatccaggttcataat
ggggatgtaatagagcggcatggcaaccgatcctccgaaggctctcgccccgcgcaggag
cagaatgctctggaaaacggcctccctcgccaggctgcccgcagcacgagcccttccccg
gagaatggatttgctgttgcccaggacaagtgcgactccgagaaggacagagaagagaac
ctgacacttctacctcgccggaaacgaggaagacggaaactggagcggccgaccaaatac
gtcgagcaccgcgaggacgagatcggggactcttcgaagaatgagggagctcgaggcagc
ccacgtgggggagtaggctgggaaatcagtctgcgccagagacccatgcccagggtaacc
ttccaggccggtgacccttattacattagcaagaggaccagagaggaattgctggccaag
tggaagatggaggcagaaaagaaggccaaagtggtttccataatgaactcgatagaggag
tacggagagatagtagccaagcctcagacagcctgtggcaccatcagcccactgatcact
gcaccaccaccaccaccaccaacaccacccccaatacagcaacagcatcaactaacccag
gctcttcccaaagctcaaccacaaccacaaatgcagcctttaccccagcaacagcctcct
gcacagcagcaacagcctacagacccagcatctcccacagtggccaccacgccagagcca
gtgcctataggggatggagataagacctcaccaaagtctgctgacacagaggctgagtat
gaggatggcagaggttttggcattggcgagttggtgtgggggaaactgcgtggtttctct
tggtggcctggacgcatcatctcctggtgtatgaccgataaaagccgagctgctgaggga
accagatgggtcaagtggttcggtgattgcaaattctctgtgatctgtgttgagaagttg
ttgcctttgagttccttctgcactgcttttcaccagcccacttacaacaaacagccaatg
tacaagaaagccatctatgaggtgctacaggtagccagcagtagagcaggaaaagtgttc
ctttccggtcctgagagtgacgacaccgatacttcgaaatcggtggacatgcagaacaag
cagatgattgaatgggccatgaaaggattccagcccactggccccaagggcctagagcct
ccagaagaggagcgtaacacatataaggaagtgtaccccgaaacctgggtggagcccgaa
gccgcgtacgcacccccacccgccaaaaggcctcgcaaaagcacaagcacagagaaaccc
aaggtgaaagacatcatcgacgaaagaacccgagagaggcttgtgtacgaagtgcgccag
aagtgcaggaatattgaagatatttgcatctcttgtggaaccctgaacgtttcccttggg
cacccactcttctgtggaggaatgtgccaaagctgtaagaactgcttcttggagtgcgca
taccagtatgacgatgacggctatcagtcttactgcacaatctgctgtggagggagggaa
gtgctcatgtgtggaaacaataactgctgcaggtgtttctgtgtagagtgtgtggatctt
ctagttgggccaggtgcagcacaagctgcaataaaggaggacccttggaactgctacatg
tgcggacagaagcatcagttcggtctgctagaacgacgatctgactggcccaatcgtctg
caacacttctttgccaacaaccacgaccaggactttgaacctccaaagctctacccttct
gttctggcagagaagagaaagcctattcgtgtgttatcactcttcgatggaattgctaca
gggctgctggtgcttaaagagctaggcattcaggtggatcgctacgtggcctctgagata
tgtgaggactccatcagtgtagggatcgggcgcatcatgtatgttggggacgtgaggaac
gtcacacgcaagcacatacaagagtggggaccttttgatctcgtcatcggaggaagcccc
tgtaacgagctgtctatagttaatccagcacggaaaggtctctacgagggcacggggagg
ctgttcttcgagttttaccgacttttacatgaagctcgtcctaaggaaggagacgacagg
cctttcttctggctttttgagaacgtagtggctatgggtgtcagtgacaagagggacatc
tctcgctttttagagtgcaacccagtgatgatagatgcaaaggaagtgtctgctgcccat
cgtgcccgctacttctggggaaaccttccgggcatgaacagacctctgactgccatgtgc
tctgacaaactggacctgcaaggctgtcttgaacatggcaggactgcaaagtttgataaa
gtgaggaccatcaccactcgggcgaattccataaagcagggcaaagatcagcacttacct
gtttacatgaatgacagagaggacatgctgtggtgcactgagatggagaggttattcggc
tttcccgtccactacacagacgtgtccaacatgagtcggttggcgaggcagaggctgctc
ggccgctcatggagtgtcccggtcatccgccacctgtttgcaccactcaaagagtatttc
gcctgtgtgtga
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