Silurus meridionalis (southern catfish): 124391442
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Entry
124391442 CDS
T08004
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00260
Glycine, serine and threonine metabolism
smeo00270
Cysteine and methionine metabolism
smeo00450
Selenocompound metabolism
smeo01100
Metabolic pathways
smeo01230
Biosynthesis of amino acids
Module
smeo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
124391442 (cth)
00270 Cysteine and methionine metabolism
124391442 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124391442 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124391442 (cth)
Enzymes [BR:
smeo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
124391442 (cth)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124391442 (cth)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
124391442
NCBI-ProteinID:
XP_046713972
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Position
1:complement(33316089..33334746)
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AA seq
402 aa
AA seq
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MASQSSEMSGFCPEFRSFATDAIHAGQEPEQWSSMAVVPPISLSTTFKQFGPGKHAGFEY
SRSGNPTRNCLEKAVAALDGARHCVALASGLAATTTIVHMLKTGDGIVCMNDVYGGTNRY
FKRIAAEIGYDVSFADCTKLEVLKAALKPNTKLLWIETPTNPMMKVVDIKACSEIAHAHN
KDIIVVVDNTFMSAYFQRPLALGADLCMYSATKYMNGHSDVVMGLISVNSETLYEKLKYL
QNALGAVPSPFDCYLCNRGLKTLSLRMKQHFRNALAVAKFLEADCRVEKVLFPGLPSHPQ
YELTKKQCTGCPGMITFYIKGKLEHATTFLNNLKLFALAESLGGYESLAEHPAIMTHASV
SEEQRMELGITDTLIRLSVGLEDEEDIIADLDQALGAAHAKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagagcagtgagatgtctggattctgccctgagttccggtctttcgccacg
gacgcgattcacgccggccaggaacccgagcagtggagctccatggcggtggtgcctccg
atttcactgtccaccaccttcaaacagttcggtcctggaaaacacgcgggttttgagtac
agtcgcagtgggaatcccacacggaactgtctggaaaaagccgtggccgcactggatgga
gctcgacactgtgttgctctggcgtctggattagccgctacgacgaccatcgtgcacatg
ctgaagaccggcgatgggatcgtgtgcatgaacgacgtctacggaggaaccaatcggtat
tttaaaaggatcgctgcggagatcggctatgacgtctccttcgctgactgcaccaagctg
gaggtgttaaaagcagccctcaaacccaacacgaagctgttgtggattgaaactccaacc
aatccgatgatgaaggttgtggacattaaagcctgctcagaaatcgcacatgcgcacaac
aaggacattattgtggtcgtggacaacaccttcatgtccgcgtacttccagcgccccctg
gccctgggagcagacttgtgcatgtactcggccacaaagtacatgaacgggcacagtgac
gtcgtcatggggctgatttctgtgaacagtgaaaccctgtatgaaaaactgaaatatttg
cagaatgctctaggtgccgtcccgtccccgttcgactgctacttgtgtaatcgtggactg
aagacgttgtccctgagaatgaagcagcacttcaggaacgcgctggctgtggcgaagttt
ctcgaggctgattgcagggtggagaaagtgcttttcccaggtctaccgtctcacccccag
tacgagctgacgaagaagcagtgcacaggatgtcctgggatgatcaccttctacattaaa
ggcaaactggaacacgccactacgttcctcaacaacctcaagttgtttgctctcgctgaa
agtctcggaggctatgagagtctggctgagcacccggcgatcatgacccacgcctcggtg
tcagaagagcagaggatggagctgggaatcacagacacactgatccgtctctctgtggga
ctggaggacgaggaggacattatcgcagacctggatcaagctcttggtgcagctcatgca
aagaattga
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